RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ADNP2Q6IQ32 1131 aa16.46■□□□□ 0.23
CHTOP-203ENST00000368690 MRGPREQ86SM8 312 aa16.46■□□□□ 0.23
CHTOP-203ENST00000368690 TOR1AIP2Q8NFQ8 470 aa16.46■□□□□ 0.23
CHTOP-203ENST00000368690 RNFT2Q96EX2 444 aa16.46■□□□□ 0.23
CHTOP-203ENST00000368690 WACQ9BTA9 647 aa16.46■□□□□ 0.23
CHTOP-203ENST00000368690 RERGLQ9H628 205 aa16.46■□□□□ 0.23
CHTOP-203ENST00000368690 LIN7BQ9HAP6 207 aa16.46■□□□□ 0.23
CHTOP-203ENST00000368690 CBLCQ9ULV8 474 aa16.46■□□□□ 0.23
CHTOP-203ENST00000368690 SMIM30A4D0T7 59 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 NME6O75414 186 aaPredicted RBP16.45■□□□□ 0.22
CHTOP-203ENST00000368690 SOAT1P35610 550 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 AVPR1BP47901 424 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 KCNJ5P48544 419 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 HTRA4P83105 476 aaPredicted RBP16.45■□□□□ 0.22
CHTOP-203ENST00000368690 PTSQ03393 145 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 CDH18Q13634 790 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 TAF12Q16514 161 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 ENTPD8Q5MY95 495 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 SLCO4C1Q6ZQN7 724 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 ZNF366Q8N895 744 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 SLC7A13Q8TCU3 470 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 SLC38A5Q8WUX1 472 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 NEURL3Q96EH8 262 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 WDR34Q96EX3 536 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 FAM83CQ9BQN1 747 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 MBD1Q9UIS9 605 aaPredicted RBP16.45■□□□□ 0.22
CHTOP-203ENST00000368690 RPS10-NUDT3A0A1W2PQS6 291 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 CARNS1A5YM72 827 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 TUBAL3A6NHL2 446 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 TRIM77I1YAP6 450 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 CHST10O43529 356 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 LIMS3P0CW19 117 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 LIMS4P0CW20 117 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 GSTM3P21266 225 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 MAPK9P45984 424 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 POU6F2P78424 691 aaPredicted RBP16.45■□□□□ 0.22
CHTOP-203ENST00000368690 UBE3AQ05086 875 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 MADCAM1Q13477 382 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 ARHGAP15Q53QZ3 475 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 TMEM65Q6PI78 240 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 LUZP2Q86TE4 346 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 IQCF1Q8N6M8 205 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 NEIL3Q8TAT5 605 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 PHF21AQ96BD5 680 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 OR2M2Q96R28 347 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 KCNN2Q9H2S1 579 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 FKBP7Q9Y680 259 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 CDH23Q9H251 3354 aa16.45■□□□□ 0.22
CHTOP-203ENST00000368690 A0A1B0GVI7 797 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 A8MX80 341 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 CHRM5P08912 532 aaPredicted RBP16.44■□□□□ 0.22
CHTOP-203ENST00000368690 CTNNB1P35222 781 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 MTNR1AP48039 350 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 CTBP2P56545 445 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 SRP54P61011 504 aaKnown RBP16.44■□□□□ 0.22
CHTOP-203ENST00000368690 MC1RQ01726 317 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 HSF2Q03933 536 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 AANATQ16613 207 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 ZNF284Q2VY69 593 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 ACSM5Q6NUN0 579 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 FAM122CQ6P4D5 195 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 COMMD7Q86VX2 200 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 LRRC28Q86X40 367 aaPredicted RBP16.44■□□□□ 0.22
CHTOP-203ENST00000368690 ADGRG3Q86Y34 549 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 CELF5Q8N6W0 485 aaKnown RBP16.44■□□□□ 0.22
CHTOP-203ENST00000368690 ZNF655Q8N720 491 aaPredicted RBP16.44■□□□□ 0.22
CHTOP-203ENST00000368690 SMG7Q92540 1137 aaKnown RBP16.44■□□□□ 0.22
CHTOP-203ENST00000368690 RFT1Q96AA3 541 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 ECHDC3Q96DC8 303 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 MED8Q96G25 268 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 RNF32Q9H0A6 362 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 CYSLTR2Q9NS75 346 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 FBXW2Q9UKT8 454 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 AKAP8O43823 692 aaKnown RBP16.44■□□□□ 0.22
CHTOP-203ENST00000368690 SH3BGRLO75368 114 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 CATP04040 527 aaKnown RBP16.44■□□□□ 0.22
CHTOP-203ENST00000368690 IRF1P10914 325 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 GKP32189 559 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 FOXD4Q12950 439 aaPredicted RBP16.44■□□□□ 0.22
CHTOP-203ENST00000368690 TYW3Q6IPR3 259 aaKnown RBP16.44■□□□□ 0.22
CHTOP-203ENST00000368690 C1orf94Q6P1W5 598 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 SERPINA13PQ6UXR4 307 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 MARCH9Q86YJ5 346 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 OR11H7Q8NGC8 314 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 HERVK_113Q902F9 699 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 WBP2Q969T9 261 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 KCTD12Q96CX2 325 aaKnown RBP16.44■□□□□ 0.22
CHTOP-203ENST00000368690 PPP1R16AQ96I34 528 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 ZSWIM3Q96MP5 696 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 HDHD2Q9H0R4 259 aa16.44■□□□□ 0.22
CHTOP-203ENST00000368690 MTIF3Q9H2K0 278 aaKnown RBP16.44■□□□□ 0.22
CHTOP-203ENST00000368690 KDM4EB2RXH2 506 aaPredicted RBP16.43■□□□□ 0.22
CHTOP-203ENST00000368690 GABRPO00591 440 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 LZTS3O60299 673 aaPredicted RBP16.43■□□□□ 0.22
CHTOP-203ENST00000368690 KLHL18O94889 574 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 RRASP10301 218 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 RFX3P48380 749 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 TAP2Q03519 686 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 SNTA1Q13424 505 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 SNAPC1Q16533 368 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms