RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PDGFAP04085 211 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 SNRPB2P08579 225 aaKnown RBP12.87□□□□□ -0.35
TPM3-211ENST00000368531 SOX11P35716 441 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 CASP9P55211 416 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 PRR5P85299 388 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 MFAP5Q13361 173 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 LY6DQ14210 128 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 GKAP1Q5VSY0 366 aaPredicted RBP12.87□□□□□ -0.35
TPM3-211ENST00000368531 PRR22Q8IZ63 422 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 OR8K3Q8NH51 312 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 C9orf43Q8TAL5 461 aaPredicted RBP12.87□□□□□ -0.35
TPM3-211ENST00000368531 NUBPLQ8TB37 319 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 ADIPOR1Q96A54 375 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 ERP27Q96DN0 273 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 OTUB1Q96FW1 271 aaPredicted RBP12.87□□□□□ -0.35
TPM3-211ENST00000368531 C16orf58Q96GQ5 468 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 CCDC115Q96NT0 180 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 SMAD5Q99717 465 aaKnown RBP12.87□□□□□ -0.35
TPM3-211ENST00000368531 TRIM4Q9C037 500 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 NEUROD4Q9HD90 331 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 SERHLQ9NQF3 203 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 ABI3Q9P2A4 366 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 VPS4AQ9UN37 437 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 CFL2Q9Y281 166 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 PCDHGA9Q9Y5G4 932 aaKnown RBP12.87□□□□□ -0.35
TPM3-211ENST00000368531 LOC100653049A0A140TA62 436 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 ASPDHA6ND91 283 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 ANGPT2O15123 496 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 ZNF354AO60765 605 aaPredicted RBP12.86□□□□□ -0.35
TPM3-211ENST00000368531 ERN1O75460 977 aaKnown RBP12.86□□□□□ -0.35
TPM3-211ENST00000368531 KRT34O76011 436 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 WDPCPO95876 746 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 C1QCP02747 245 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 UQCRC2P22695 453 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 CHI3L1P36222 383 aaPredicted RBP12.86□□□□□ -0.35
TPM3-211ENST00000368531 SSR4P51571 173 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 CORO7P57737 925 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 OC90Q02509 493 aaPredicted RBP12.86□□□□□ -0.35
TPM3-211ENST00000368531 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
TPM3-211ENST00000368531 TLR1Q15399 786 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 GTDC1Q4AE62 458 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 PAGE3Q5JUK9 113 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 ZNF468Q5VIY5 522 aaPredicted RBP12.86□□□□□ -0.35
TPM3-211ENST00000368531 ANGPTL8Q6UXH0 198 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 C6orf120Q7Z4R8 191 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 SNX32Q86XE0 403 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 SLC44A2Q8IWA5 706 aaPredicted RBP12.86□□□□□ -0.35
TPM3-211ENST00000368531 TMEM156Q8N614 296 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 POU5F2Q8N7G0 328 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 CCDC197Q8NCU1 140 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 PSMA8Q8TAA3 256 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 BCAS4Q8TDM0 211 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 ASB15Q8WXK1 588 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 SLC9A6Q92581 669 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 JADE3Q92613 823 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 MS4A4EQ96PG1 132 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 LMF1Q96S06 567 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 RASL10BQ96S79 203 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 SLC35A5Q9BS91 424 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 NXF5Q9H1B4 397 aaKnown RBP12.86□□□□□ -0.35
TPM3-211ENST00000368531 EPS8L2Q9H6S3 715 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 SLC52A3Q9NQ40 469 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 SLC6A13Q9NSD5 602 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 TMEM45AQ9NWC5 275 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 YARS2Q9Y2Z4 477 aaKnown RBP12.86□□□□□ -0.35
TPM3-211ENST00000368531 NDUFAF1Q9Y375 327 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 ZNF451Q9Y4E5 1061 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 EML6Q6ZMW3 1958 aa12.86□□□□□ -0.35
TPM3-211ENST00000368531 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 A0A1W2PP18 115 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 DYTNA2CJ06 578 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 ERVH48-1M5A8F1 160 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 NDUFAB1O14561 156 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 HMGN2P05204 90 aaKnown RBP12.85□□□□□ -0.35
TPM3-211ENST00000368531 GABRA3P34903 492 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 SOX3P41225 446 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 PPICP45877 212 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 PRIM2P49643 509 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 RPS26P62854 115 aaKnown RBP12.85□□□□□ -0.35
TPM3-211ENST00000368531 ARG2P78540 354 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 LRRC74AQ0VAA2 488 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 GAB1Q13480 694 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 ZNHIT3Q15649 155 aaPredicted RBP12.85□□□□□ -0.35
TPM3-211ENST00000368531 MMEL1Q495T6 779 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 LACTB2Q53H82 288 aaPredicted RBP12.85□□□□□ -0.35
TPM3-211ENST00000368531 PIGGQ5H8A4 983 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 IL20RBQ6UXL0 311 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 NPSR1Q6W5P4 371 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 MSANTD1Q6ZTZ1 278 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 ASB18Q6ZVZ8 466 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 CATSPER1Q8NEC5 780 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 OR56A1Q8NGH5 318 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 OR5M3Q8NGP4 307 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 GOT1L1Q8NHS2 421 aaPredicted RBP12.85□□□□□ -0.35
TPM3-211ENST00000368531 SLC22A8Q8TCC7 542 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 PNPT1Q8TCS8 783 aaKnown RBP12.85□□□□□ -0.35
TPM3-211ENST00000368531 SFXN5Q8TD22 340 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 GTF2H4Q92759 462 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 GIMAP5Q96F15 307 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 LCORQ96JN0 433 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms