RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 BICRALQ6AI39 1079 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 RPTNQ6XPR3 784 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 MRGPRGQ86SM5 289 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 EXOC3L1Q86VI1 746 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 TICAM1Q8IUC6 712 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 ZNF808Q8N4W9 903 aaPredicted RBP17.4■□□□□ 0.38
CKS1B-203ENST00000368439 KAT2AQ92830 837 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 LCORQ96JN0 433 aaPredicted RBP17.4■□□□□ 0.38
CKS1B-203ENST00000368439 SECISBP2Q96T21 854 aaKnown RBP17.4■□□□□ 0.38
CKS1B-203ENST00000368439 ZNF703Q9H7S9 590 aaPredicted RBP17.4■□□□□ 0.38
CKS1B-203ENST00000368439 LRTM1Q9HBL6 345 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 ZFP64Q9NPA5 681 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 PFDN4Q9NQP4 134 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 SENP1Q9P0U3 644 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 ENTPD4Q9Y227 616 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 GPR55Q9Y2T6 319 aaPredicted RBP17.4■□□□□ 0.38
CKS1B-203ENST00000368439 FIS1Q9Y3D6 152 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 TRAF6Q9Y4K3 522 aa17.4■□□□□ 0.38
CKS1B-203ENST00000368439 PHF3Q92576 2039 aaKnown RBP17.4■□□□□ 0.38
CKS1B-203ENST00000368439 CAPN14A8MX76 684 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 E9PLN8 166 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 TP53I11O14683 189 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 LSM1O15116 133 aaKnown RBP17.39■□□□□ 0.37
CKS1B-203ENST00000368439 TO15178 435 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 RGS14O43566 566 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 PLOD3O60568 738 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 NME6O75414 186 aaPredicted RBP17.39■□□□□ 0.37
CKS1B-203ENST00000368439 BCAS2O75934 225 aaPredicted RBP17.39■□□□□ 0.37
CKS1B-203ENST00000368439 LINC00032P0C843 101 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 NAGAP17050 411 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 DRD5P21918 477 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 PPICP45877 212 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 NRG3P56975 720 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 KCNJ2P63252 427 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 RFTN2Q52LD8 501 aaPredicted RBP17.39■□□□□ 0.37
CKS1B-203ENST00000368439 CES4AQ5XG92 561 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 DESI1Q6ICB0 168 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 C3P1Q6ZMU1 363 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 IKBIPQ70UQ0 350 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 TRILQ7L0X0 811 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 CD163Q86VB7 1156 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 FAM9CQ8IZT9 166 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 CLYBLQ8N0X4 340 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 OR7G2Q8NG99 324 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 CDC26Q8NHZ8 85 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 PHF10Q8WUB8 498 aaKnown RBP17.39■□□□□ 0.37
CKS1B-203ENST00000368439 DIO2Q92813 273 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 HGDQ93099 445 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 HSPBAP1Q96EW2 488 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 ZIM3Q96PE6 472 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 VKORC1Q9BQB6 163 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 ANGPTL4Q9BY76 406 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 GIMAP4Q9NUV9 329 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 PRODH2Q9UF12 536 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 CELSR2Q9HCU4 2923 aa17.39■□□□□ 0.37
CKS1B-203ENST00000368439 CENPEQ02224 2701 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 CACNA1CQ13936 2221 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 ACOX3O15254 700 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 PPM1BO75688 479 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 TPOP07202 933 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 TUBBP07437 444 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 ESRRAP11474 423 aaPredicted RBP17.38■□□□□ 0.37
CKS1B-203ENST00000368439 NEFHP12036 1026 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 MPIP34949 423 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 SERPINB5P36952 375 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 DCTP40126 519 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 CASP3P42574 277 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 TMED10P49755 219 aaKnown RBP17.38■□□□□ 0.37
CKS1B-203ENST00000368439 DCAF7P61962 342 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 ART3Q13508 389 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 CDSNQ15517 529 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 TBCELQ5QJ74 424 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 FNDC7Q5VTL7 733 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 ZNF787Q6DD87 383 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 PAOXQ6QHF9 649 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 MARVELD2Q8N4S9 558 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 TWIST2Q8WVJ9 160 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 VSTM2LQ96N03 204 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 BTBD9Q96Q07 612 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 DOHHQ9BU89 302 aa17.38■□□□□ 0.37
CKS1B-203ENST00000368439 EML4Q9HC35 981 aaKnown RBP17.38■□□□□ 0.37
CKS1B-203ENST00000368439 SSU72Q9NP77 194 aaKnown RBP17.38■□□□□ 0.37
CKS1B-203ENST00000368439 BOKQ9UMX3 212 aaPredicted RBP17.38■□□□□ 0.37
CKS1B-203ENST00000368439 ATP6AP2A0A1C7CYW4 349 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 FRG2CA6NGY1 282 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 PIP5K1BO14986 540 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 RGS16O15492 202 aaPredicted RBP17.37■□□□□ 0.37
CKS1B-203ENST00000368439 CTIFO43310 598 aaKnown RBP17.37■□□□□ 0.37
CKS1B-203ENST00000368439 ATP6AP2O75787 350 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 JUNP05412 331 aaKnown RBP17.37■□□□□ 0.37
CKS1B-203ENST00000368439 CT45A8P0DMV1 189 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 CT45A9P0DMV2 189 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 SDC1P18827 310 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 AGAP20933 346 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 ENDOUP21128 410 aaKnown RBP17.37■□□□□ 0.37
CKS1B-203ENST00000368439 SLC10A1Q14973 349 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 CT45A2Q5DJT8 189 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 XKR7Q5GH72 579 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 SH2D4BQ5SQS7 431 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 TMEM81Q6P7N7 255 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms