RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 RLIMQ9NVW2 624 aa7.42□□□□□ -1.22
MUC1-209ENST00000368396 PLCL2Q9UPR0 1127 aa7.42□□□□□ -1.22
MUC1-209ENST00000368396 SLC9A8Q9Y2E8 581 aa7.42□□□□□ -1.22
MUC1-209ENST00000368396 SIT1Q9Y3P8 196 aa7.42□□□□□ -1.22
MUC1-209ENST00000368396 CSNK1G3Q9Y6M4 447 aa7.42□□□□□ -1.22
MUC1-209ENST00000368396 COMMD3-BMI1R4GMX3 469 aa7.42□□□□□ -1.22
MUC1-209ENST00000368396 TDRD6O60522 2096 aaKnown RBP7.42□□□□□ -1.22
MUC1-209ENST00000368396 SCN3AQ9NY46 2000 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 CCDC163A0A0D9SF12 145 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 BLACEA4D250 179 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 FITM1A5D6W6 292 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 TLCD2A6NGC4 264 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 RHPN2P1A8MT19 583 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 FAM227AF5H4B4 570 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 H3BSA7 217 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 SLC1A7O00341 560 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 FAAHO00519 579 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 B4GAT1O43505 415 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 CHST10O43529 356 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 FOXS1O43638 330 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 RDH16O75452 317 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 MED26O95402 600 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 ZIC2O95409 532 aaPredicted RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 CPNE6O95741 557 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 OXSR1O95747 527 aaPredicted RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 ALPPP05187 535 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 H1F0P07305 194 aaKnown RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 CTSBP07858 339 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 SLC35E2P0CK97 266 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 ACP2P11117 423 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 AGXTP21549 392 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 FUT4P22083 530 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 ELAVL4P26378 380 aaKnown RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 EPHA2P29317 976 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 GSTT1P30711 240 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 PRKAR1BP31321 381 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 TTKP33981 857 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 GGT2P36268 569 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 MAP3K8P41279 467 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 CTSKP43235 329 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 CSNK1EP49674 416 aaKnown RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 AFF3P51826 1226 aaKnown RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 EMP3P54852 163 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 SKP1P63208 163 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 IL5RAQ01344 420 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 ID2Q02363 134 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 TEKQ02763 1124 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 CHRNEQ04844 493 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 FAM53BQ14153 422 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 GANABQ14697 944 aaKnown RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 DEFB110Q30KQ9 67 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 ARHGAP11BQ3KRB8 267 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 GARNL3Q5VVW2 1013 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 FAM92BQ6ZTR7 304 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 OLIG3Q7RTU3 272 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 C16orf62Q7Z3J2 963 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 GPR141Q7Z602 305 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 B3GNT8Q7Z7M8 397 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 RBM45Q8IUH3 476 aaKnown RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 CCDC71Q8IV32 467 aaPredicted RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 SHISA5Q8N114 240 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 CARFQ8N187 725 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 DEFB123Q8N688 67 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 OR9Q2Q8NGE9 314 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 OR9A4Q8NGU2 314 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 CNIH3Q8TBE1 160 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 ADAMTS15Q8TE58 950 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 ADAMTS18Q8TE60 1221 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 HOXB13Q92826 284 aaPredicted RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 COL26A1Q96A83 441 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 CTHRC1Q96CG8 243 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 CNDP2Q96KP4 475 aaKnown RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 NIPSNAP1Q9BPW8 284 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 TUBA1CQ9BQE3 449 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 WFDC6Q9BQY6 131 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 ADNPQ9H2P0 1102 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 POLR1BQ9H9Y6 1135 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 ZNF556Q9HAH1 456 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 NMNAT1Q9HAN9 279 aaPredicted RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 EQTNQ9NQ60 294 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 UCKL1Q9NWZ5 548 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 MAT2BQ9NZL9 334 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 ENOPH1Q9UHY7 261 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 A4GNTQ9UNA3 340 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 MGAT4BQ9UQ53 548 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 PCDHGA6Q9Y5G7 932 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 RNF215Q9Y6U7 377 aa7.41□□□□□ -1.22
MUC1-209ENST00000368396 GOLGA4Q13439 2230 aaKnown RBP7.41□□□□□ -1.22
MUC1-209ENST00000368396 CEP192Q8TEP8 1941 aa7.4□□□□□ -1.22
MUC1-209ENST00000368396 EML5Q05BV3 1969 aa7.4□□□□□ -1.22
MUC1-209ENST00000368396 IGHV5-51A0A0C4DH38 117 aa7.4□□□□□ -1.22
MUC1-209ENST00000368396 TRBV4-1A0A0J9YWV2 114 aa7.4□□□□□ -1.22
MUC1-209ENST00000368396 A0A1B0GVT2 93 aa7.4□□□□□ -1.22
MUC1-209ENST00000368396 A0A1W2PRQ8 180 aa7.4□□□□□ -1.22
MUC1-209ENST00000368396 HYKKA2RU49 373 aa7.4□□□□□ -1.22
MUC1-209ENST00000368396 ZNF701M0R085 212 aaPredicted RBP7.4□□□□□ -1.22
MUC1-209ENST00000368396 M0R3H8 397 aa7.4□□□□□ -1.22
MUC1-209ENST00000368396 KIF1CO43896 1103 aaKnown RBP7.4□□□□□ -1.22
MUC1-209ENST00000368396 MRPS14O60783 128 aaKnown RBP7.4□□□□□ -1.22
MUC1-209ENST00000368396 SDC3O75056 442 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms