RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C18orf63Q68DL7 685 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 FAM166AQ6J272 317 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 ALKBH2Q6NS38 261 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 FAM214BQ7L5A3 538 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 ATG4DQ86TL0 474 aaPredicted RBP13.13□□□□□ -0.31
VAMP4-202ENST00000367740 DTX2Q86UW9 622 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 TANKQ92844 425 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 PINK1Q9BXM7 581 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 MS4A8Q9BY19 250 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 GRIP2Q9C0E4 1043 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 NXF5Q9H1B4 397 aaKnown RBP13.13□□□□□ -0.31
VAMP4-202ENST00000367740 ALG2Q9H553 416 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 EML4Q9HC35 981 aaKnown RBP13.13□□□□□ -0.31
VAMP4-202ENST00000367740 IARS2Q9NSE4 1012 aaKnown RBP13.13□□□□□ -0.31
VAMP4-202ENST00000367740 B3GALT5Q9Y2C3 310 aa13.13□□□□□ -0.31
VAMP4-202ENST00000367740 PRAMEF25A6NGN4 478 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 SERINC4A6NH21 518 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 WASHC1A8K0Z3 465 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 B4DXG7 233 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 AKR1B15C9JRZ8 316 aaPredicted RBP13.12□□□□□ -0.31
VAMP4-202ENST00000367740 DLX3O60479 287 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 CD3EP07766 207 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 CD22P20273 847 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 SSR2P43308 183 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 DSCR9P59020 149 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 PON3Q15166 354 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 NNATQ16517 81 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 C4orf22Q6V702 233 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 PLCZ1Q86YW0 608 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 ZNF525Q8N782 197 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 ZNF615Q8N8J6 731 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 C2CD4AQ8NCU7 369 aaPredicted RBP13.12□□□□□ -0.31
VAMP4-202ENST00000367740 SRFBP1Q8NEF9 429 aaKnown RBP13.12□□□□□ -0.31
VAMP4-202ENST00000367740 C17orf47Q8NEP4 570 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 ANKRD7Q92527 254 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 TACO1Q9BSH4 297 aaKnown RBP13.12□□□□□ -0.31
VAMP4-202ENST00000367740 FAM167BQ9BTA0 163 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 SORBS1Q9BX66 1292 aaKnown RBP13.12□□□□□ -0.31
VAMP4-202ENST00000367740 TRIM2Q9C040 744 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 LACRTQ9GZZ8 138 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 OR10A4Q9H209 315 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 MOCS1Q9NZB8 636 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 ZNF175Q9Y473 711 aa13.12□□□□□ -0.31
VAMP4-202ENST00000367740 A0A1W2PS29 197 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 NPEPPSL1A6NEC2 478 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 ZIC3O60481 467 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 SH3BGRLO75368 114 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 TNFRSF21O75509 655 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 GPR75O95800 540 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 AIFM1O95831 613 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 CT62P0C5K7 136 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 GPX3P22352 226 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 GALNSP34059 522 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 SUCLG1P53597 346 aaKnown RBP13.11□□□□□ -0.31
VAMP4-202ENST00000367740 HNRNPH2P55795 449 aaKnown RBP13.11□□□□□ -0.31
VAMP4-202ENST00000367740 IRX1P78414 480 aaPredicted RBP13.11□□□□□ -0.31
VAMP4-202ENST00000367740 CDKL1Q00532 357 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 SLAMF1Q13291 335 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 AP5B1Q2VPB7 878 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 ANKRD22Q5VYY1 191 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 CAVIN1Q6NZI2 390 aaKnown RBP13.11□□□□□ -0.31
VAMP4-202ENST00000367740 CCDC170Q8IYT3 715 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 AGGF1Q8N302 714 aaeCLIP13.11□□□□□ -0.31
VAMP4-202ENST00000367740 PPM1NQ8N819 430 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 OR6K3Q8NGY3 331 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 HES6Q96HZ4 224 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 SERPINB12Q96P63 405 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 GBP4Q96PP9 640 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 EGFL8Q99944 293 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 EHD1Q9H4M9 534 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 CXorf21Q9HAI6 301 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 PLSCR4Q9NRQ2 329 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 MS4A12Q9NXJ0 267 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 WHRNQ9P202 907 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 DKKL1Q9UK85 242 aa13.11□□□□□ -0.31
VAMP4-202ENST00000367740 MRPS18CQ9Y3D5 142 aaKnown RBP13.11□□□□□ -0.31
VAMP4-202ENST00000367740 LOC100289279A0A1B0GTE1 492 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 MAGEB16A2A368 324 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 SAP18O00422 153 aaKnown RBP13.1□□□□□ -0.31
VAMP4-202ENST00000367740 CBFA2T2O43439 604 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 UGT2B11O75310 529 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 AQP8O94778 261 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 ALDOAP04075 364 aaKnown RBP13.1□□□□□ -0.31
VAMP4-202ENST00000367740 CCDC175P0C221 793 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 PEPDP12955 493 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 NAGAP17050 411 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 PSMB1P20618 241 aaKnown RBP13.1□□□□□ -0.31
VAMP4-202ENST00000367740 PTNP21246 168 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 GZMKP49863 264 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 HNMTP50135 292 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 TBX2Q13207 712 aaPredicted RBP13.1□□□□□ -0.31
VAMP4-202ENST00000367740 CTU2Q2VPK5 515 aaKnown RBP13.1□□□□□ -0.31
VAMP4-202ENST00000367740 NUP54Q7Z3B4 507 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 GPR180Q86V85 440 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 GPSM1Q86YR5 675 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 ZNF473Q8WTR7 871 aaKnown RBP13.1□□□□□ -0.31
VAMP4-202ENST00000367740 HTRA1Q92743 480 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 S100PBPQ96BU1 408 aa13.1□□□□□ -0.31
VAMP4-202ENST00000367740 MSI2Q96DH6 328 aaKnown RBP13.1□□□□□ -0.31
VAMP4-202ENST00000367740 OMA1Q96E52 524 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms