RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 MED21Q13503 144 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 DUSP5Q16690 384 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 ZNF542PQ5EBM4 170 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 TMEM154Q6P9G4 183 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 LYPD8Q6UX82 237 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 B3GNT6Q6ZMB0 384 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 ZNF621Q6ZSS3 439 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 SATL1Q86VE3 508 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 KMT5CQ86Y97 462 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 SDF2Q99470 211 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 RHNO1Q9BSD3 238 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 MFRPQ9BY79 579 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 PIGUQ9H490 435 aa8.66□□□□□ -1.02
CNIH4-202ENST00000366857 TRBV4-1A0A0J9YWV2 114 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 CBFA2T3O75081 653 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 TNFAIP8O95379 198 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 ZGLP1P0C6A0 271 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 FOSL2P15408 326 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 SLC5A2P31639 672 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 DDX39BQ13838 428 aaKnown RBP8.65□□□□□ -1.02
CNIH4-202ENST00000366857 MAD2L1BPQ15013 274 aaPredicted RBP8.65□□□□□ -1.02
CNIH4-202ENST00000366857 SKIV2LQ15477 1246 aaKnown RBP8.65□□□□□ -1.02
CNIH4-202ENST00000366857 NADK2Q4G0N4 442 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 RBM48Q5RL73 367 aaKnown RBP8.65□□□□□ -1.02
CNIH4-202ENST00000366857 SPARTQ8N0X7 666 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 AVL9Q8NBF6 648 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 SLC38A9Q8NBW4 561 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 FBXO30Q8TB52 745 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 WDR77Q9BQA1 342 aaPredicted RBP8.65□□□□□ -1.02
CNIH4-202ENST00000366857 RTN4RQ9BZR6 473 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 ROGDIQ9GZN7 287 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 CXorf21Q9HAI6 301 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 SH2D2AQ9NP31 389 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 TCRBV16S1A1N1A0A5B0 115 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 FAM227AF5H4B4 570 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 FMO6PO60774 539 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 NGFRP08138 427 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 ELK4P28324 431 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 GGT2P36268 569 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 MC3RP41968 323 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 MVKQ03426 396 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 ELOCQ15369 112 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 CTF1Q16619 201 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.65□□□□□ -1.02
CNIH4-202ENST00000366857 NUP54Q7Z3B4 507 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 OR4C6Q8NH72 309 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 BBS10Q8TAM1 723 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 RPS4Y2Q8TD47 263 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 FAR1Q8WVX9 515 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 EME1Q96AY2 570 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 MS4A4EQ96PG1 132 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 ZNF347Q96SE7 839 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 MAP3K3Q99759 626 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 ACTRT3Q9BYD9 372 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 MS4A12Q9NXJ0 267 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.65□□□□□ -1.02
CNIH4-202ENST00000366857 SIT1Q9Y3P8 196 aa8.65□□□□□ -1.02
CNIH4-202ENST00000366857 GNG14A0A1W2PPG7 69 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 SH3BGRLO75368 114 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 MYO1DO94832 1006 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 NTN1O95631 604 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 DCNP07585 359 aaKnown RBP8.65□□□□□ -1.03
CNIH4-202ENST00000366857 ALOX12P18054 663 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 NELFEP18615 380 aaKnown RBP8.65□□□□□ -1.03
CNIH4-202ENST00000366857 AGXTP21549 392 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 IGFBP4P22692 258 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 STT3AP46977 705 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 AFF3P51826 1226 aaKnown RBP8.65□□□□□ -1.03
CNIH4-202ENST00000366857 SLC37A1P57057 533 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 PLIN5Q00G26 463 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 UBE2UQ5VVX9 321 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 BHLHB9Q6PI77 547 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 QSOX2Q6ZRP7 698 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 OLIG3Q7RTU3 272 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 DEFB123Q8N688 67 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 SLC16A11Q8NCK7 471 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 SRFBP1Q8NEF9 429 aaKnown RBP8.65□□□□□ -1.03
CNIH4-202ENST00000366857 SLC7A13Q8TCU3 470 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 SEPHS2Q99611 448 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 KLHDC3Q9BQ90 382 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 RAD21L1Q9H4I0 556 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 RAPGEFL1Q9UHV5 662 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 FBXO4Q9UKT5 387 aa8.65□□□□□ -1.03
CNIH4-202ENST00000366857 A0A1W2PNU3 283 aaPredicted RBP8.64□□□□□ -1.03
CNIH4-202ENST00000366857 CDHR4A6H8M9 788 aa8.64□□□□□ -1.03
CNIH4-202ENST00000366857 SAC3D1A6NKF1 404 aa8.64□□□□□ -1.03
CNIH4-202ENST00000366857 ZNF749O43361 778 aa8.64□□□□□ -1.03
CNIH4-202ENST00000366857 PTP4A3O75365 173 aa8.64□□□□□ -1.03
CNIH4-202ENST00000366857 KRT75O95678 551 aa8.64□□□□□ -1.03
CNIH4-202ENST00000366857 GPR75O95800 540 aa8.64□□□□□ -1.03
CNIH4-202ENST00000366857 CCDC159P0C7I6 412 aa8.64□□□□□ -1.03
CNIH4-202ENST00000366857 ENDOUP21128 410 aaKnown RBP8.64□□□□□ -1.03
CNIH4-202ENST00000366857 MATN1P21941 496 aa8.64□□□□□ -1.03
CNIH4-202ENST00000366857 HOXD12P35452 270 aa8.64□□□□□ -1.03
CNIH4-202ENST00000366857 PLA2G16P53816 162 aa8.64□□□□□ -1.03
CNIH4-202ENST00000366857 CTBP2P56545 445 aa8.64□□□□□ -1.03
CNIH4-202ENST00000366857 SNRPGP62308 76 aaKnown RBP8.64□□□□□ -1.03
CNIH4-202ENST00000366857 ILF3Q12906 894 aaKnown RBP eCLIP8.64□□□□□ -1.03
CNIH4-202ENST00000366857 BNIP3Q12983 259 aa8.64□□□□□ -1.03
CNIH4-202ENST00000366857 ILKQ13418 452 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms