RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 PSMA6P60900 246 aaKnown RBP11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 PRRT3Q5FWE3 981 aa11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 FAM83HQ6ZRV2 1179 aaPredicted RBP11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 SIX5Q8N196 739 aa11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 COG8Q96MW5 612 aa11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 MTG2Q9H4K7 406 aa11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 GIMAP2Q9UG22 337 aa11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 SLC10A3P09131 477 aa11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 HNRNPFP52597 415 aaKnown RBP11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 PSPHP78330 225 aa11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 RPL6Q02878 288 aaKnown RBP11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 PTPRCAPQ14761 206 aa11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 MAMDC2Q7Z304 686 aaPredicted RBP11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 PRRC1Q96M27 445 aa11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 TMEM98Q9Y2Y6 226 aa11.45□□□□□ -0.58
CDC42BPA-203ENST00000366766 TSPAN4O14817 238 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 UPK1BO75841 260 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 GBAP04062 536 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 ATF4P18848 351 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 ZNF81P51508 661 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 SCAMP4Q969E2 229 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 KCNK6Q9Y257 313 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 IRS2Q9Y4H2 1338 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 GABRA3P34903 492 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 HTR3AP46098 478 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 GPR62Q9BZJ7 368 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 LAMP1P11279 417 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 AMZ1Q400G9 498 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 TMEM173Q86WV6 379 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 INTS6Q9UL03 887 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 PLCL2Q9UPR0 1127 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 ZNF878C9JN71 531 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 RBMXP38159 391 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 PPP1R8Q12972 351 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 SNTB2Q13425 540 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 KCTD11Q693B1 232 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 GTF2IRD2BQ6EKJ0 949 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 GTF2IRD2Q86UP8 949 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 SYNPOQ8N3V7 929 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 BARD1Q99728 777 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 IRF2BPLQ9H1B7 796 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 ZNF304Q9HCX3 659 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 EMCNQ9ULC0 261 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 ANHXE9PGG2 379 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 EIF2DP41214 584 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 RIDAP52758 137 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 SGCBQ16585 318 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 TMEM19Q96HH6 336 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 SLC35A3Q9Y2D2 325 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 CFAP20Q9Y6A4 193 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 H7C2Y5 167 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 PYCR1P32322 319 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 STK19P49842 368 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 SLC7A9P82251 487 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 GRM7Q14831 915 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 RHEBQ15382 184 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 CHDHQ8NE62 594 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 ACVR1CQ8NER5 493 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 OR2L2Q8NH16 312 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 PTERQ96BW5 349 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 SERINC2Q96SA4 455 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 LHPPQ9H008 270 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 DMRT3Q9NQL9 472 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 TMPRSS11EQ9UL52 423 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 H2AFB2P0C5Z0 115 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 CTSAP10619 480 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 CLRN1P58418 232 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 TLDC1Q6P9B6 456 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 PLXDC1Q8IUK5 500 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 KLHDC8AQ8IYD2 350 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 LRRC56Q8IYG6 542 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 ACSL6Q9UKU0 697 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 NDRG2Q9UN36 371 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 ATG12O94817 140 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 ADH6P28332 368 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 GNMTQ14749 295 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 RNF111Q6ZNA4 994 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 DCP2Q8IU60 420 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 UBE2J2Q8N2K1 259 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 JSRP1Q96MG2 331 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 GMEB2Q9UKD1 530 aa11.44□□□□□ -0.58
CDC42BPA-203ENST00000366766 CLDN24A6NM45 220 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 FAM155AB1AL88 458 aaPredicted RBP11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 C22orf42Q6IC83 251 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 SHFQ7M4L6 423 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 ATOH8Q96SQ7 321 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 HSPA12AO43301 675 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 FAM69AQ5T7M9 428 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 TMEM205Q6UW68 189 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 RASGRP3Q8IV61 690 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 OR6N1Q8NGY5 312 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 STOML3Q8TAV4 291 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 KLK6Q92876 244 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 FOXJ1Q92949 421 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 ARMC5Q96C12 935 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 IL23AQ9NPF7 189 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 TMLHEQ9NVH6 421 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 SLC7A11Q9UPY5 501 aa11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 COL16A1Q07092 1604 aaPredicted RBP11.43□□□□□ -0.58
CDC42BPA-203ENST00000366766 GNB5O14775 395 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms