RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TAS2R10Q9NYW0 307 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 EHD3Q9NZN3 535 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 LPAR3Q9UBY5 353 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 EXO1Q9UQ84 846 aaKnown RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 COMMD10Q9Y6G5 202 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 KCNE2Q9Y6J6 123 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 VWFP04275 2813 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 YLPM1P49750 1951 aaKnown RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 MALRD1Q5VYJ5 2156 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 SYCE3A1L190 88 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 NPEPPSL1A6NEC2 478 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 GLOD5A6NK44 160 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 AKR1B15C9JRZ8 316 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 CLOCKO15516 846 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 LMX1BO60663 402 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 AQP8O94778 261 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 SCELO95171 688 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 AIFM1O95831 613 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 AHSGP02765 367 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 COX7A2P14406 83 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 ITGA2P17301 1181 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 EPORP19235 508 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 TPSB2P20231 275 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 HIST1H1TP22492 207 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 CPN2P22792 545 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 ABCD3P28288 659 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 KCNJ1P48048 391 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 KCNC1P48547 511 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 NAP1L1P55209 391 aaKnown RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 HNRNPH2P55795 449 aaKnown RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 IL2P60568 153 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 IRX1P78414 480 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 PLIN5Q00G26 463 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 SETDB1Q15047 1291 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 TPSAB1Q15661 275 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 TSC22D1Q15714 1073 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 CTU2Q2VPK5 515 aaKnown RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 CYB5R2Q6BCY4 276 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 ALKBH2Q6NS38 261 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 LRRC8EQ6NSJ5 796 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 CASC4Q6P4E1 433 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 ENPP6Q6UWR7 440 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 PEX26Q7Z412 305 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 P4HA3Q7Z4N8 544 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 MILR1Q7Z6M3 343 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 IFNEQ86WN2 208 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 UBQLNLQ8IYU4 475 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 TAGAPQ8N103 731 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 C2CD4AQ8NCU7 369 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 KBTBD8Q8NFY9 601 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 FNDC9Q8TBE3 224 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 TP53INP1Q96A56 240 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 C11orf24Q96F05 449 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 RBM18Q96H35 190 aaKnown RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 HES6Q96HZ4 224 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 KCNC2Q96PR1 638 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 RHNO1Q9BSD3 238 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 NTMT1Q9BV86 223 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 MS4A8Q9BY19 250 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 ACTR6Q9GZN1 396 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 RPF2Q9H7B2 306 aaKnown RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 NT5DC2Q9H857 520 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 METTL7AQ9H8H3 244 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 COPS7BQ9H9Q2 264 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 EML4Q9HC35 981 aaKnown RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 SNX15Q9NRS6 342 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 TAS2R13Q9NYV9 303 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 DMGDHQ9UI17 866 aaKnown RBP7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 B3GALT5Q9Y2C3 310 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 FREM1Q5H8C1 2179 aa7.6□□□□□ -1.19
HMGB1P39-201ENST00000366304 EXPH5Q8NEV8 1989 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 A0A088AWK7 358 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 OR6C76A6NM76 312 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 UBFD1O14562 309 aaKnown RBP7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 CLGNO14967 610 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 TAPBPO15533 448 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 RAMP1O60894 148 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 UGT2B11O75310 529 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 PPM1BO75688 479 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 WDR47O94967 919 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 GNAZP19086 355 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 S1PR1P21453 382 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 ZNF10P21506 573 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 SLC6A8P48029 635 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 CLDN20P56880 219 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 RPS13P62277 151 aaKnown RBP7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 TPM4P67936 248 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 DOC2AQ14183 400 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 RCN2Q14257 317 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 TRIP13Q15645 432 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 ZNF672Q499Z4 452 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 NCMAPQ5T1S8 102 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 OR5M10Q6IEU7 315 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 OR2A2Q6IF42 318 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 C12orf54Q6X4T0 127 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 ST13P4Q8IZP2 240 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 ZNF525Q8N782 197 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 UBL4BQ8N7F7 174 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 TTLQ8NG68 377 aa7.59□□□□□ -1.19
HMGB1P39-201ENST00000366304 RIT1Q92963 219 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms