RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 FUT8Q9BYC5 575 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 ACOXLQ9NUZ1 547 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 VPS54Q9P1Q0 977 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 SLC2A6Q9UGQ3 507 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 KLHL21Q9UJP4 597 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 FBXW2Q9UKT8 454 aa3.06□□□□□ -1.92
RNU4-28P-201ENST00000364739 NUDT21O43809 227 aaKnown RBP3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 PRB2P02812 416 aaPredicted RBP3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 XCR1P46094 333 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 OR1D4P47884 311 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 TRPC1P48995 793 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 UCP2P55851 309 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 ZKSCAN8Q15776 578 aaPredicted RBP3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 GLRA4Q5JXX5 417 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 ZNF658Q5TYW1 1059 aaPredicted RBP3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 ZNF530Q6P9A1 599 aaPredicted RBP3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 IGFL2Q6UWQ7 119 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 SERPINA12Q8IW75 414 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 GPR65Q8IYL9 337 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 C9orf85Q96MD7 179 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 GPR137Q96N19 417 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 ACCSQ96QU6 501 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 CPXM1Q96SM3 734 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 TSPYL1Q9H0U9 437 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 TSPY26PQ9H489 355 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 ERVK-18Q9QC07 812 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 TRPC4Q9UBN4 977 aa3.05□□□□□ -1.92
RNU4-28P-201ENST00000364739 WI2-2373I1.2A0A1W2PRP0 233 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 SLC28A1O00337 649 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 NOL4O94818 638 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 C17orf67Q0P5P2 114 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 EIF4EBP2Q13542 120 aaPredicted RBP3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 PDE7AQ13946 482 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 ZIC1Q15915 447 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 WSCD1Q658N2 575 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 PYROXD2Q8N2H3 581 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 OR2L5Q8NG80 312 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 TFB1MQ8WVM0 346 aaKnown RBP3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 P3H4Q92791 437 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 BCL2L2Q92843 193 aaPredicted RBP3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 LHX4Q969G2 390 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 CFAP36Q96G28 342 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 TECTBQ96PL2 329 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 APOOQ9BUR5 198 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 MRPL9Q9BYD2 267 aaKnown RBP3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 NLNQ9BYT8 704 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 SLC5A7Q9GZV3 580 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 TMEM9Q9P0T7 183 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 CA5BQ9Y2D0 317 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 NTNG1Q9Y2I2 539 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 RPH3AQ9Y2J0 694 aaPredicted RBP3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 SNX5Q9Y5X3 404 aa3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 ZFP37Q9Y6Q3 630 aaPredicted RBP3.04□□□□□ -1.92
RNU4-28P-201ENST00000364739 IGLV8-61A0A075B6I0 122 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 A0A0J9YVX5 310 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 FAM231BA6NCW3 169 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 MFSD2BA6NFX1 497 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 EEF2KO00418 725 aaKnown RBP3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 LCMT2O60294 686 aaKnown RBP3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 STAM2O75886 525 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 APBB3O95704 486 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 ACTL6AO96019 429 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 HSPB1P04792 205 aaKnown RBP3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 SFTPBP07988 381 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 CCDC166P0CW27 439 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 CT45A10P0DMU9 189 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 FERP16591 822 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 FCARP24071 287 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 ALDH3B2P48448 385 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 PITPNBP48739 271 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 P2RY4P51582 365 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 C11orf88Q6PI97 169 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 ST7LQ8TDW4 575 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 FRAT1Q92837 279 aaPredicted RBP3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 DNAJA3Q96EY1 480 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 C16orf74Q96GX8 76 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 NMUR2Q9GZQ4 415 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 ABCG4Q9H172 646 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 CWC25Q9NXE8 425 aaPredicted RBP3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 NDUFA13Q9P0J0 144 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 RPS6KB2Q9UBS0 482 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 NARFQ9UHQ1 456 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 MAD2L2Q9UI95 211 aa3.03□□□□□ -1.92
RNU4-28P-201ENST00000364739 PTPRUQ92729 1446 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 TNRQ92752 1358 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 LRRD1A4D1F6 860 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 C11orf98E9PRG8 122 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 PANO1I0J062 215 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 SDC3O75056 442 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 ATP6V1G1O75348 118 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 ECDO95905 644 aaPredicted RBP3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 HOXB7P09629 217 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 GHRP10912 638 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 OR3A4PP47883 348 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 NLRP11P59045 1033 aaKnown RBP3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 FUT11Q495W5 492 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 NKAIN2Q5VXU1 208 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 PRR5LQ6MZQ0 368 aa3.02□□□□□ -1.93
RNU4-28P-201ENST00000364739 ATRAIDQ6UW56 229 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms