RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 TMIEQ8NEW7 156 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 OR2L2Q8NH16 312 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 PHOSPHO1Q8TCT1 267 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 SETD7Q8WTS6 366 aaKnown RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 ARRDC3Q96B67 414 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 PSD2Q9BQI7 771 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 ALOXE3Q9BYJ1 711 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 FBXO8Q9NRD0 319 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 NCDNQ9UBB6 729 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 GPR34Q9UPC5 381 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 INSL6Q9Y581 213 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 KIAA1549LQ6ZVL6 1849 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 SAP18O00422 153 aaKnown RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 TBX6O95947 436 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 OPN1SWP03999 348 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 CEBPBP17676 345 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 GABRB1P18505 474 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 TNFRSF1BP20333 461 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 CASP9P55211 416 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 TAS2R50P59544 299 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 VBP1P61758 197 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 MEF2AQ02078 507 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 C2orf80Q0P641 193 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 ZNF846Q147U1 533 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 HIST2H2ACQ16777 129 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 SLC5A12Q1EHB4 618 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 MICAQ29983 383 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 IFI44LQ53G44 452 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 TCEAL5Q5H9L2 206 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 PRAMEF14Q5SWL7 426 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 HIST2H2AA3Q6FI13 130 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 UNC5DQ6UXZ4 953 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 ETV3LQ6ZN32 361 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 GRASPQ7Z6J2 395 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-202ENST00000360642 ZNF605Q86T29 641 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 TRAPPC5Q8IUR0 188 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 SLC5A8Q8N695 610 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 RHOXF1Q8NHV9 184 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 SPPL3Q8TCT6 385 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 SPPL2AQ8TCT8 520 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 PPCDCQ96CD2 204 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 NUS1Q96E22 293 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 KCNC2Q96PR1 638 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 RNF32Q9H0A6 362 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 RLIMQ9NVW2 624 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 TAS2R9Q9NYW1 312 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 KCMF1Q9P0J7 381 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 PSORS1C1Q9UIG5 152 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 ICKQ9UPZ9 632 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 TESMINQ9Y4I5 508 aa6.91□□□□□ -1.3
CLCN3-202ENST00000360642 MUC22E2RYF6 1773 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-202ENST00000360642 A0A0A6YYJ9 748 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 VIPP01282 170 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 RB1P06400 928 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 KLK1P06870 262 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 HNRNPA1P09651 372 aaKnown RBP eCLIP6.9□□□□□ -1.3
CLCN3-202ENST00000360642 OCM2P0CE71 109 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 OCMP0CE72 109 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-202ENST00000360642 C6P13671 934 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 ANXA8P13928 327 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 EPCAMP16422 314 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 PSMB9P28065 219 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 BMPR1AP36894 532 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 OR1E2P47887 323 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 PHEXP78562 749 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 OCA2Q04671 838 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 ITGADQ13349 1161 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 RGS21Q2M5E4 152 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 TRIM40Q6P9F5 258 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 IKBIPQ70UQ0 350 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 RNF130Q86XS8 419 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 ZNF740Q8NDX6 193 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 OR10G2Q8NGC3 310 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 NFKBIDQ8NI38 313 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 STT3BQ8TCJ2 826 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 BRIX1Q8TDN6 353 aaKnown RBP6.9□□□□□ -1.3
CLCN3-202ENST00000360642 PHF10Q8WUB8 498 aaKnown RBP6.9□□□□□ -1.3
CLCN3-202ENST00000360642 SNRNP27Q8WVK2 155 aaKnown RBP6.9□□□□□ -1.3
CLCN3-202ENST00000360642 RSPRY1Q96DX4 576 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 ZNF514Q96K75 400 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-202ENST00000360642 NIPSNAP1Q9BPW8 284 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 OR52A5Q9H2C5 316 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 IL23AQ9NPF7 189 aa6.9□□□□□ -1.3
CLCN3-202ENST00000360642 CCDC177Q9NQR7 707 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-202ENST00000360642 PCYT1BQ9Y5K3 369 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-202ENST00000360642 FUOMA2VDF0 154 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 PI15O43692 258 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 POP7O75817 140 aaKnown RBP6.9□□□□□ -1.31
CLCN3-202ENST00000360642 ABHD16AO95870 558 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 LCKP06239 509 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 GAAP10253 952 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 GPR1P46091 355 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 XCR1P46094 333 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 PSMD7P51665 324 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 ST8SIA6P61647 398 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 NCS1P62166 190 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 CDK6Q00534 326 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 ELP6Q0PNE2 266 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 SMAD4Q13485 552 aaKnown RBP6.9□□□□□ -1.31
CLCN3-202ENST00000360642 DGCR6Q14129 220 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms