RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 LINC00471Q8N535 108 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 C12orf76Q8N812 135 aaPredicted RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 Q8N9G6 341 aaPredicted RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 SETD6Q8TBK2 473 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 SLC25A46Q96AG3 418 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 INSM2Q96T92 566 aaPredicted RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 TRMT61BQ9BVS5 477 aaKnown RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 EQTNQ9NQ60 294 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 PRSS16Q9NQE7 514 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 MBNL1Q9NR56 388 aaKnown RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 MUTYHQ9UIF7 546 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 ENTPD4Q9Y227 616 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 KCNK6Q9Y257 313 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 YARS2Q9Y2Z4 477 aaKnown RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 MDC1Q14676 2089 aaKnown RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 CASC3O15234 703 aaKnown RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 MID1O15344 667 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 FRS3O43559 492 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 EIF2S1P05198 315 aaKnown RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 NR2F6P10588 404 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 ACADMP11310 421 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 IL7P13232 177 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 CPEP16870 476 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 DRD3P35462 400 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 WNT4P56705 351 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 COPZ1P61923 177 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 HTRA3P83110 453 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 CDK5Q00535 292 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 GNA13Q14344 377 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 KRT33BQ14525 404 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 TAB1Q15750 504 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 BCL2A1Q16548 175 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 BAK1Q16611 211 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 TMEM35AQ53FP2 167 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 OR2G6Q5TZ20 316 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 KIAA1161Q6NSJ0 714 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 ZNF544Q6NX49 715 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 TMEM64Q6YI46 380 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 ZNF517Q6ZMY9 492 aaPredicted RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 UTS2BQ765I0 119 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 KIF18BQ86Y91 864 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 CCDC116Q8IYX3 515 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 TTLQ8NG68 377 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 OR2A1Q8NGT9 310 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 CAPSLQ8WWF8 208 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 SLC9A6Q92581 669 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 RNFT2Q96EX2 444 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 WDFY2Q96P53 400 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 NEDD4LQ96PU5 975 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 SRRQ9GZT4 340 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 BCL2L10Q9HD36 194 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 TIGARQ9NQ88 270 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 TOR4AQ9NXH8 423 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 TESQ9UGI8 421 aaKnown RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 SLC13A4Q9UKG4 626 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 ACSL5Q9ULC5 683 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 ATG4BQ9Y4P1 393 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 A0A1W2PQ09 198 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 A0A1W2PS29 197 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 SMIM30A4D0T7 59 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 FAM170BA6NMN3 283 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 PGRMC2O15173 223 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 PRODHO43272 600 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 COQ9O75208 318 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 AIFM1O95831 613 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 IL1AP01583 271 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 KRT8P05787 483 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 CLEC2LP0C7M8 214 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 GSTM3P21266 225 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 HIST1H1TP22492 207 aaPredicted RBP8.08□□□□□ -1.12
RFX3-202ENST00000358730 MAN2A2P49641 1150 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 RPS25P62851 125 aaKnown RBP8.08□□□□□ -1.12
RFX3-202ENST00000358730 DUSP2Q05923 314 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 CAMK1Q14012 370 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 IRF4Q15306 451 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 KLHL22Q53GT1 634 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 C3orf38Q5JPI3 329 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 SLC25A30Q5SVS4 291 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 NXNL2Q5VZ03 156 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 SLC27A4Q6P1M0 643 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 FAM131AQ6UXB0 335 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 SLC36A4Q6YBV0 504 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 SHFQ7M4L6 423 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 LAPTM4BQ86VI4 370 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 TMEM163Q8TC26 289 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 SFXN5Q8TD22 340 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 CHAC2Q8WUX2 184 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 CNRIP1Q96F85 164 aaPredicted RBP8.08□□□□□ -1.12
RFX3-202ENST00000358730 C16orf58Q96GQ5 468 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 CAMK1GQ96NX5 476 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 PRR14Q9BWN1 585 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 PINK1Q9BXM7 581 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 NEK6Q9HC98 313 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 ABCB9Q9NP78 766 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 MRPS30Q9NP92 439 aaKnown RBP8.08□□□□□ -1.12
RFX3-202ENST00000358730 CNIH4Q9P003 139 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 ZNF221Q9UK13 617 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 DNMT3AQ9Y6K1 912 aaPredicted RBP8.08□□□□□ -1.12
RFX3-202ENST00000358730 A0A087WUU8 490 aa8.08□□□□□ -1.12
RFX3-202ENST00000358730 A0A1W2PR48 441 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms