RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 WDR53Q7Z5U6 358 aaPredicted RBP13.79□□□□□ -0.2
CCNE1-202ENST00000357943 APLFQ8IW19 511 aaPredicted RBP13.79□□□□□ -0.2
CCNE1-202ENST00000357943 MSRB3Q8IXL7 192 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 GALNT16Q8N428 558 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 DPP10Q8N608 796 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 SIRT6Q8N6T7 355 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 TRIML2Q8N7C3 387 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 PSMF1Q92530 271 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 RCN3Q96D15 328 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 AURKBQ96GD4 344 aaPredicted RBP13.79□□□□□ -0.2
CCNE1-202ENST00000357943 SLC35A5Q9BS91 424 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 ITPAQ9BY32 194 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 DEFB126Q9BYW3 111 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 IL1RL2Q9HB29 575 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 ARL8BQ9NVJ2 186 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 SLC25A37Q9NYZ2 338 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 VAPAQ9P0L0 249 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 VPS4AQ9UN37 437 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 HEMK1Q9Y5R4 338 aaPredicted RBP13.79□□□□□ -0.2
CCNE1-202ENST00000357943 A0A096LPI6 279 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 OR6C76A6NM76 312 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 BBIP1A8MTZ0 92 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 MRASO14807 208 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 COQ9O75208 318 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 ERN1O75460 977 aaKnown RBP13.79□□□□□ -0.2
CCNE1-202ENST00000357943 ZFAND5O76080 213 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 KCNH1O95259 989 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 CBX6O95503 412 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 HMGN2P05204 90 aaKnown RBP13.79□□□□□ -0.2
CCNE1-202ENST00000357943 ZCCHC18P0CG32 403 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 PRDX6P30041 224 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 CPA2P48052 419 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 CASP9P55211 416 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 LASP1Q14847 261 aaKnown RBP13.79□□□□□ -0.2
CCNE1-202ENST00000357943 MYBPC3Q14896 1274 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 COQ5Q5HYK3 327 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 B3GNTL1Q67FW5 361 aaPredicted RBP13.79□□□□□ -0.2
CCNE1-202ENST00000357943 FCRLBQ6BAA4 426 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 TCTN3Q6NUS6 607 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 SLC29A4Q7RTT9 530 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 C6orf120Q7Z4R8 191 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 DHDDSQ86SQ9 333 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 OR56A1Q8NGH5 318 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 OR8K3Q8NH51 312 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 SFXN5Q8TD22 340 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 ADIPOR1Q96A54 375 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 MOAP1Q96BY2 351 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 C16orf58Q96GQ5 468 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 VSTM2LQ96N03 204 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 MS4A4EQ96PG1 132 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 PHF12Q96QT6 1004 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 GAL3ST4Q96RP7 486 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 YIPF4Q9BSR8 244 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 WWTR1Q9GZV5 400 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 LHPPQ9H008 270 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 FOLH1BQ9HBA9 442 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCNE1-202ENST00000357943 GPATCH2Q9NW75 528 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 PRODH2Q9UF12 536 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 MED13Q9UHV7 2174 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 TRBV5-3A0A0A0MS03 114 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 C2orf92A0A1B0GVN3 265 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 AIM2O14862 343 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 MAN1A2O60476 641 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 CHI3L1P36222 383 aaPredicted RBP13.78□□□□□ -0.2
CCNE1-202ENST00000357943 SOX8P57073 446 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 RPS26P62854 115 aaKnown RBP13.78□□□□□ -0.2
CCNE1-202ENST00000357943 NFYCQ13952 458 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 KRT72Q14CN4 511 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 NNATQ16517 81 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 SAXO2Q658L1 398 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 MFSD12Q6NUT3 480 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 H3F3CQ6NXT2 135 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 YTHDF3Q7Z739 585 aaKnown RBP13.78□□□□□ -0.2
CCNE1-202ENST00000357943 NUBPLQ8TB37 319 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 FBXO30Q8TB52 745 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 PNPT1Q8TCS8 783 aaKnown RBP13.78□□□□□ -0.2
CCNE1-202ENST00000357943 ZFP90Q8TF47 636 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 APOBEC4Q8WW27 367 aaKnown RBP13.78□□□□□ -0.2
CCNE1-202ENST00000357943 OTUB1Q96FW1 271 aaPredicted RBP13.78□□□□□ -0.2
CCNE1-202ENST00000357943 SLC39A3Q9BRY0 314 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 EPS8L2Q9H6S3 715 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 CFL2Q9Y281 166 aa13.78□□□□□ -0.2
CCNE1-202ENST00000357943 CORO7P57737 925 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 AP2B1P63010 937 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 PSG6Q00889 435 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 ZNF155Q12901 538 aaPredicted RBP13.77□□□□□ -0.21
CCNE1-202ENST00000357943 CAPRIN1Q14444 709 aaKnown RBP13.77□□□□□ -0.21
CCNE1-202ENST00000357943 JMJD6Q6NYC1 403 aaPredicted RBP13.77□□□□□ -0.21
CCNE1-202ENST00000357943 BORAQ6PGQ7 559 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 BHLHB9Q6PI77 547 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 ANGPTL8Q6UXH0 198 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 ZNF441Q8N8Z8 693 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 PCYOX1LQ8NBM8 494 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 FDCSPQ8NFU4 85 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 EXTL1Q92935 676 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 NEURL3Q96EH8 262 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 TRIM8Q9BZR9 551 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 SERHL2Q9H4I8 314 aa13.77□□□□□ -0.21
CCNE1-202ENST00000357943 CDCP1Q9H5V8 836 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms