RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 C8orf33Q9H7E9 229 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-203ENST00000357654 TMEM248Q9NWD8 314 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 MTCH1Q9NZJ7 389 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 RCOR3Q9P2K3 495 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-203ENST00000357654 KIF13AQ9H1H9 1805 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 C9orf172C9J069 976 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 SULT2B1O00204 365 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 UBFD1O14562 309 aaKnown RBP5.54□□□□□ -1.52
BRCA1-203ENST00000357654 NIPSNAP2O75323 286 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 DIRAS1O95057 198 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 PET100P0DJ07 73 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 NUDT6P53370 316 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 FAM182AQ5T1J6 154 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 FSTL4Q6MZW2 842 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 LEG1Q6P5S2 330 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 LARP4Q71RC2 724 aaKnown RBP eCLIP5.54□□□□□ -1.52
BRCA1-203ENST00000357654 SLC30A8Q8IWU4 369 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 OR10AD1Q8NGE0 317 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 OR5H2Q8NGV7 314 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 CMTM2Q8TAZ6 248 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 SAMD11Q96NU1 681 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 TEX10Q9NXF1 929 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-203ENST00000357654 OR2M5A3KFT3 312 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 TLX2O43763 284 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-203ENST00000357654 SLC19A2O60779 497 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 APBB3O95704 486 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 SERPINE2P07093 398 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 PFKMP08237 780 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 ARSDP51689 593 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 EMP2P54851 167 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 PRSS12P56730 875 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 DDR1Q08345 913 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 ST3GAL1Q11201 340 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 RPA4Q13156 261 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 MEP1AQ16819 746 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 TUSC1Q2TAM9 212 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 SLC36A3Q495N2 470 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 GGNBP1Q5YKI7 109 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 C3P1Q6ZMU1 363 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 HSD17B13Q7Z5P4 300 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-203ENST00000357654 KIAA0907Q7Z7F0 614 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-203ENST00000357654 RNF130Q86XS8 419 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 NRROSQ86YC3 692 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 OR4A16Q8NH70 328 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 PIWIL2Q8TC59 973 aaKnown RBP5.54□□□□□ -1.52
BRCA1-203ENST00000357654 SLC35F5Q8WV83 523 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 SLC35C1Q96A29 364 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 HYLS1Q96M11 299 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 TMEM209Q96SK2 561 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 NTPCRQ9BSD7 190 aaKnown RBP5.54□□□□□ -1.52
BRCA1-203ENST00000357654 SHARPINQ9H0F6 387 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 TRAPPC2LQ9UL33 140 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 KIDINS220Q9ULH0 1771 aa5.54□□□□□ -1.52
BRCA1-203ENST00000357654 TRBC2A0A5B9 178 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 OR6C70A6NIJ9 312 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 LRRC30A6NM36 301 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 MEIS3P2A8K0S8 358 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 DNASE2O00115 360 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PRRG2O14669 202 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 EFSO43281 561 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 H1F0P07305 194 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 DCNP07585 359 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 CD44P16070 742 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 RAB3BP20337 219 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ETV3P41162 512 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ASPAP45381 313 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 EIF5AL1Q6IS14 154 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PTCRAQ6ISU1 281 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 LRRN1Q6UXK5 716 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 TRILQ7L0X0 811 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 SH3RF1Q7Z6J0 888 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 TMPRSS12Q86WS5 348 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 HSD17B11Q8NBQ5 300 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 OR51G2Q8NGK0 314 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ZNF675Q8TD23 568 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 SMPDL3AQ92484 453 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PFDN5Q99471 154 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 CXorf56Q9H5V9 222 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 FAM86C1Q9NVL1 165 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 TMEM51Q9NW97 253 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 CNTN6Q9UQ52 1028 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 TMED5Q9Y3A6 229 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PCDHGA9Q9Y5G4 932 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 SYT7O43581 403 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 LEFTY1O75610 366 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 CLIC3O95833 236 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 STSP08842 583 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ALADP13716 330 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ACVR1BP36896 505 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 MMP14P50281 582 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 NAA20P61599 178 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 RPS18P62269 152 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 GBE1Q04446 702 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 TSTQ16762 297 aaKnown RBP5.53□□□□□ -1.52
BRCA1-203ENST00000357654 PRAMEF20Q5VT98 475 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 OR5L1Q8NGL2 311 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 SLC38A5Q8WUX1 472 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 ACSS3Q9H6R3 686 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 TAS2R10Q9NYW0 307 aa5.53□□□□□ -1.52
BRCA1-203ENST00000357654 GNG12Q9UBI6 72 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms