RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 GXYLT2A0PJZ3 443 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 WTIPA6NIX2 430 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 A6NL46 340 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF487B1APH4 448 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SSX5O60225 188 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 CREG1O75629 220 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 CDRT1O95170 752 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 GCAP28676 217 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 DLSTP36957 453 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 NAA10P41227 235 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SLAMF1Q13291 335 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 PPA1Q15181 289 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 BTBD16Q32M84 506 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SLC35F5Q8WV83 523 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 PEX13Q92968 403 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SERINC2Q96SA4 455 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SDHAF2Q9NX18 166 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 REV1Q9UBZ9 1251 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SH3BGRL2Q9UJC5 107 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SARDHQ9UL12 918 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 RPH3AQ9Y2J0 694 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 PCDHGA8Q9Y5G5 932 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 ST14Q9Y5Y6 855 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 NUP188Q5SRE5 1749 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 TIMP1P01033 207 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 SLURP2P0DP57 97 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 MAGEA3P43357 314 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 TNFRSF4P43489 277 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 MLLT10P55197 1068 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 UFM1P61960 85 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 CNN3Q15417 329 aaKnown RBP5.28□□□□□ -1.56
PTPRD-202ENST00000356435 NXPE4Q6UWF7 544 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 USP53Q70EK8 1073 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 RPLP0P6Q8NHW5 317 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 RSC1A1Q92681 617 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 FBXL3Q9UKT7 428 aa5.28□□□□□ -1.56
PTPRD-202ENST00000356435 A0A0D9SEW6 157 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 DNAJB6O75190 326 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 PTGS2P35354 604 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 GDF5P43026 501 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 STK11Q15831 433 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 ZNF773Q6PK81 442 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 C12orf76Q8N812 135 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-202ENST00000356435 SLC37A3Q8NCC5 494 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 FAM156AQ8NDB6 213 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 SUN5Q8TC36 379 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 GLYATL2Q8WU03 294 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 MZB1Q8WU39 189 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 TXNDC15Q96J42 360 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 CRB3Q9BUF7 120 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 IKZF4Q9H2S9 585 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 UCKL1Q9NWZ5 548 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 ENTPD2Q9Y5L3 495 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 SLC22A31A6NKX4 558 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 YKT6O15498 198 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 PTHP01270 115 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 IFNA4P05014 189 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 IQCF3P0C7M6 154 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 HK3P52790 923 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 NIPAL4Q0D2K0 466 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 INCA1Q0VD86 236 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 NNATQ16517 81 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 NTRK2Q16620 822 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 SFT2D3Q587I9 215 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 ZNF648Q5T619 568 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-202ENST00000356435 Q6ZVL8 140 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 NLGN4XQ8N0W4 816 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 CLDN19Q8N6F1 224 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 OR9A2Q8NGT5 310 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 RAB8BQ92930 207 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 ANKRD60Q9BZ19 345 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 C12orf65Q9H3J6 166 aaKnown RBP5.27□□□□□ -1.57
PTPRD-202ENST00000356435 RLIMQ9NVW2 624 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 ACSL6Q9UKU0 697 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 ROBO1Q9Y6N7 1651 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 LOC100130705A0A1B0GUX0 176 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 POLR1CO15160 346 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-202ENST00000356435 EPOP01588 193 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 CD79AP11912 226 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 SLC6A8P48029 635 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 ALDH3B2P48448 385 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 DGKQP52824 942 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 RPA4Q13156 261 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 SERTAD2Q14140 314 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 SLC35F1Q5T1Q4 408 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 TRMT10BQ6PF06 316 aaKnown RBP5.27□□□□□ -1.57
PTPRD-202ENST00000356435 OR4N5Q8IXE1 308 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 SAMD12Q8N8I0 201 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 NAT8LQ8N9F0 302 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 TCEAL4Q96EI5 215 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 NTPCRQ9BSD7 190 aaKnown RBP5.27□□□□□ -1.57
PTPRD-202ENST00000356435 RHCGQ9UBD6 479 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 SNED1Q8TER0 1413 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 LOC102725191A0A1B0GVB3 256 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 HNRNPA2B1P22626 353 aaKnown RBP5.27□□□□□ -1.57
PTPRD-202ENST00000356435 STK19P49842 368 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-202ENST00000356435 CDK3Q00526 305 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 TGFBIQ15582 683 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 ZFAND4Q86XD8 727 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 OR8J3Q8NGG0 315 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms