RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SYNPO2LQ9H987 977 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 KDM4FA0A1W2PPD8 638 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 TGM5O43548 720 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 FBXL22Q6P050 247 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 TSPEARQ8WU66 669 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 ARL6Q9H0F7 186 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 SDHAF2Q9NX18 166 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 BDKRB2P30411 391 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 FKBP1AP62942 108 aaKnown RBP16.47■□□□□ 0.23
COL27A1-201ENST00000356083 MEP1AQ16819 746 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 RNF175Q8N4F7 328 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 EBF4Q9BQW3 602 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 CRB3Q9BUF7 120 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 PTBP2Q9UKA9 531 aaKnown RBP16.47■□□□□ 0.23
COL27A1-201ENST00000356083 NOTOA8MTQ0 251 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 TUSC2O75896 110 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 F10P00742 488 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 LBX1P52954 281 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 KLBQ86Z14 1044 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 CABIN1Q9Y6J0 2220 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 SYT7O43581 403 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 C3P1Q6ZMU1 363 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 GID4Q8IVV7 300 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 AURKBQ96GD4 344 aaPredicted RBP16.47■□□□□ 0.23
COL27A1-201ENST00000356083 HHIPQ96QV1 700 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 CDC6Q99741 560 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 TMEM45AQ9NWC5 275 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 PIK3C2BO00750 1634 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 CHEK1O14757 476 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 IL3P08700 152 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 ALDH3B2P48448 385 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 SLC18B1Q6NT16 456 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 OR51L1Q8NGJ5 315 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 PBDC1Q9BVG4 233 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 ENKD1Q9H0I2 346 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 SLC2A6Q9UGQ3 507 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 SCAF4O95104 1147 aaKnown RBP16.46■□□□□ 0.23
COL27A1-201ENST00000356083 ZNF763Q0D2J5 394 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 HAS2Q92819 552 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 HRASLSQ9HDD0 168 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 PAK1IP1Q9NWT1 392 aaPredicted RBP16.46■□□□□ 0.23
COL27A1-201ENST00000356083 LGALS8O00214 317 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 RPP30P78346 268 aaKnown RBP16.46■□□□□ 0.23
COL27A1-201ENST00000356083 KHDC1Q4VXA5 237 aaKnown RBP16.46■□□□□ 0.23
COL27A1-201ENST00000356083 SHFQ7M4L6 423 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 TFAP2BQ92481 460 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 DPF1Q92782 380 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 STARD5Q9NSY2 213 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 PCDHGA1Q9Y5H4 931 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 MBD5Q9P267 1494 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 SPEF2Q9C093 1822 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 APOFQ13790 326 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 UEVLDQ8IX04 471 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 HCAR1Q9BXC0 346 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 ANKRD30BLA7E2S9 258 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 LRRTM2O43300 516 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 SNAPC5O75971 98 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 CTXN1P60606 82 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 ELP2Q6IA86 826 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 C10orf82Q8WW14 230 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 MUCL1Q96DR8 90 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 KAZALD1Q96I82 304 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 TINAGL1Q9GZM7 467 aaPredicted RBP16.46■□□□□ 0.23
COL27A1-201ENST00000356083 SLC2A8Q9NY64 477 aa16.46■□□□□ 0.23
COL27A1-201ENST00000356083 ZNF223Q9UK11 482 aaPredicted RBP16.46■□□□□ 0.23
COL27A1-201ENST00000356083 A0A1W2PQU0 124 aa16.46■□□□□ 0.22
COL27A1-201ENST00000356083 CRYZL1O95825 349 aa16.46■□□□□ 0.22
COL27A1-201ENST00000356083 SLC36A3Q495N2 470 aa16.46■□□□□ 0.22
COL27A1-201ENST00000356083 OR9A4Q8NGU2 314 aa16.46■□□□□ 0.22
COL27A1-201ENST00000356083 SYT17Q9BSW7 474 aa16.46■□□□□ 0.22
COL27A1-201ENST00000356083 HDHD5Q9BXW7 423 aa16.46■□□□□ 0.22
COL27A1-201ENST00000356083 CEBPZOSA8MTT3 80 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 MAOBP27338 520 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 PBX2P40425 430 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 HEPHL1Q6MZM0 1159 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 LINC00471Q8N535 108 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 NATD1Q8N6N6 113 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF775Q96BV0 537 aaPredicted RBP16.45■□□□□ 0.22
COL27A1-201ENST00000356083 SENP5Q96HI0 755 aaPredicted RBP16.45■□□□□ 0.22
COL27A1-201ENST00000356083 SYT3Q9BQG1 590 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 SLC31A2O15432 143 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF44P15621 663 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 GPR143P51810 404 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 GINS1Q14691 196 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 DMBX1Q8NFW5 382 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 FOXN4Q96NZ1 517 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 SNX18Q96RF0 628 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 POLR1CO15160 346 aaPredicted RBP16.45■□□□□ 0.22
COL27A1-201ENST00000356083 GSTP1P09211 210 aaKnown RBP16.45■□□□□ 0.22
COL27A1-201ENST00000356083 IMPDH1P20839 514 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 FOLR3P41439 243 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 PLA2G7Q13093 441 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF805Q5CZA5 627 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 SPANXN4Q5MJ08 99 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 PLCXD3Q63HM9 321 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 WWTR1Q9GZV5 400 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 SAV1Q9H4B6 383 aaPredicted RBP16.45■□□□□ 0.22
COL27A1-201ENST00000356083 RFPL2O75678 378 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 APOC3P02656 99 aa16.45■□□□□ 0.22
COL27A1-201ENST00000356083 HTR2AP28223 471 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms