RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TNFRSF1BP20333 461 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 STT3AP46977 705 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 MAPK10P53779 464 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 VLDLRP98155 873 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 SPEM2Q0P670 501 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 MAP4K2Q12851 820 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 TRA2AQ13595 282 aaKnown RBP eCLIP19.18■□□□□ 0.66
TRIM4-202ENST00000354241 CYP27C1Q4G0S4 372 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 IFI44LQ53G44 452 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 PWWP2BQ6NUJ5 590 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 C16orf62Q7Z3J2 963 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 BBS10Q8TAM1 723 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 CDS1Q92903 461 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 TMBIM1Q969X1 311 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 CLIP3Q96DZ5 547 aa19.18■□□□□ 0.66
TRIM4-202ENST00000354241 CNOT11Q9UKZ1 510 aaKnown RBP19.18■□□□□ 0.66
TRIM4-202ENST00000354241 CHRM4P08173 479 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 IFI6P09912 130 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 ACP2P11117 423 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 ACADSP16219 412 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 SERTAD2Q14140 314 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 PPP1R3BQ86XI6 285 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 NAXDQ8IW45 347 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 CBR4Q8N4T8 237 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 OR52R1Q8NGF1 315 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 COL21A1Q96P44 957 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 APMAPQ9HDC9 416 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 EXD2Q9NVH0 621 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 MMACHCQ9Y4U1 282 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 DIRAS1O95057 198 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 PRSS23O95084 383 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 H6PDO95479 791 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 CBX7O95931 251 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 AGR2O95994 175 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 ATP6V1C1P21283 382 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 CCDC157Q569K6 752 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 VWA2Q5GFL6 755 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 KRT73Q86Y46 540 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 ARMC8Q8IUR7 673 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 NAF1Q96HR8 494 aaKnown RBP19.17■□□□□ 0.66
TRIM4-202ENST00000354241 GIN1Q9NXP7 522 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 LIPT1Q9Y234 373 aa19.17■□□□□ 0.66
TRIM4-202ENST00000354241 COQ9O75208 318 aa19.16■□□□□ 0.66
TRIM4-202ENST00000354241 MFN2O95140 757 aa19.16■□□□□ 0.66
TRIM4-202ENST00000354241 ALOX5P09917 674 aa19.16■□□□□ 0.66
TRIM4-202ENST00000354241 TNNI3P19429 210 aa19.16■□□□□ 0.66
TRIM4-202ENST00000354241 OR1E2P47887 323 aa19.16■□□□□ 0.66
TRIM4-202ENST00000354241 ZFP36L1Q07352 338 aaKnown RBP19.16■□□□□ 0.66
TRIM4-202ENST00000354241 ZNF155Q12901 538 aaPredicted RBP19.16■□□□□ 0.66
TRIM4-202ENST00000354241 ZNF267Q14586 743 aaPredicted RBP19.16■□□□□ 0.66
TRIM4-202ENST00000354241 DUSP5Q16690 384 aa19.16■□□□□ 0.66
TRIM4-202ENST00000354241 PPP4R4Q6NUP7 873 aa19.16■□□□□ 0.66
TRIM4-202ENST00000354241 PRSS58Q8IYP2 241 aa19.16■□□□□ 0.66
TRIM4-202ENST00000354241 C7orf34Q96L11 122 aa19.16■□□□□ 0.66
TRIM4-202ENST00000354241 PELOQ9BRX2 385 aaKnown RBP19.16■□□□□ 0.66
TRIM4-202ENST00000354241 TMEM9BQ9NQ34 198 aa19.16■□□□□ 0.66
TRIM4-202ENST00000354241 SEC14L3Q9UDX4 400 aa19.16■□□□□ 0.66
TRIM4-202ENST00000354241 GPC6Q9Y625 555 aaPredicted RBP19.16■□□□□ 0.66
TRIM4-202ENST00000354241 SEC16AO15027 2179 aa19.16■□□□□ 0.66
TRIM4-202ENST00000354241 ACOX3O15254 700 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 SERPINB7O75635 380 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 PGDP52209 483 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 IST1P53990 364 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 HPCAP84074 193 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 PPP1R8Q12972 351 aaKnown RBP19.15■□□□□ 0.66
TRIM4-202ENST00000354241 BIKQ13323 160 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 DUSP7Q16829 419 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 QSOX2Q6ZRP7 698 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 CDRT4Q8N9R6 151 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 SLC38A9Q8NBW4 561 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 AGBL5Q8NDL9 886 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 ZNF570Q96NI8 536 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 CTRCQ99895 268 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 CNPPD1Q9BV87 410 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 BCL2L10Q9HD36 194 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 MKKSQ9NPJ1 570 aaPredicted RBP19.15■□□□□ 0.66
TRIM4-202ENST00000354241 ZNF639Q9UID6 485 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 SH3GLB1Q9Y371 365 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 FRYLO94915 3013 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 A0A0G2JPF8 293 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 HNRNPCL2B2RXH8 293 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 HNRNPCL3B7ZW38 293 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 HRKO00198 91 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 E2F6O75461 281 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 HNRNPCL4P0DMR1 293 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 CD247P20963 164 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 S1PR1P21453 382 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 SSTR4P31391 388 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 PDX1P52945 283 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 DUSP8Q13202 625 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 OR2T5Q6IEZ7 315 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 ZCCHC12Q6PEW1 402 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 MED25Q71SY5 747 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 PIWIL3Q7Z3Z3 882 aaKnown RBP19.15■□□□□ 0.66
TRIM4-202ENST00000354241 HMGN2P46Q86SG4 172 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 OR2T29Q8NH02 315 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 GEMIN6Q8WXD5 167 aaKnown RBP19.15■□□□□ 0.66
TRIM4-202ENST00000354241 TSLPQ969D9 159 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 TRNT1Q96Q11 434 aaKnown RBP19.15■□□□□ 0.66
TRIM4-202ENST00000354241 PIGUQ9H490 435 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms