RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 HHATLQ9HCP6 504 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CNOT2Q9NZN8 540 aaKnown RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 NPAP1Q9NZP6 1156 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 TAC3Q9UHF0 121 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 MAP4K5Q9Y4K4 846 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CFAP54Q96N23 3096 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 A0A075B6Q4 140 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 SPTY2D1-AS1A0A0U1RR47 76 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 SH3D21A4FU49 640 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 IDH3BO43837 385 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 SLITRK5O94991 958 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 SEMA3DO95025 777 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 GADD45GO95257 159 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 RECKO95980 971 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 THEGLP0DJG4 465 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 KELP23276 732 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 POU1F1P28069 291 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 AKT2P31751 481 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 ACTR1BP42025 376 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 RFX2P48378 723 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 ACTR1AP61163 376 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 SNRPNP63162 240 aaKnown RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 CDK6Q00534 326 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 BAK1Q16611 211 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 DUSP7Q16829 419 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 CRB2Q5IJ48 1285 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 THOC7Q6I9Y2 204 aaKnown RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF544Q6NX49 715 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 FAM129CQ86XR2 697 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 SPEM1Q8N4L4 309 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 GPR151Q8TDV0 419 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 GEMIN6Q8WXD5 167 aaKnown RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 TRMT61AQ96FX7 289 aaKnown RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 ASPNQ9BXN1 380 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 BHLHE41Q9C0J9 482 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 TMEM38AQ9H6F2 299 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 REEP4Q9H6H4 257 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 EXOSC4Q9NPD3 245 aaKnown RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 CLEC2DQ9UHP7 191 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 TRAPPC4Q9Y296 219 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 KLHL20Q9Y2M5 609 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 MRPS17Q9Y2R5 130 aaKnown RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 V9GYH0 126 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 WDFY3Q8IZQ1 3526 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 FEZF1A0PJY2 475 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 METTL12A8MUP2 240 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 H7BY64 318 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 SAP18O00422 153 aaKnown RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 CAPN5O15484 640 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 PRICKLE3O43900 615 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 ENTPD6O75354 484 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 MFN2O95140 757 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 SCG5P05408 212 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 CKMT1AP12532 417 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 FEN1P39748 380 aaKnown RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 TGM4P49221 684 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 CRISP1P54107 249 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 RBBP4Q09028 425 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 SLBPQ14493 270 aaKnown RBP eCLIP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF79Q15937 498 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF770Q6IQ21 691 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 ARMCX6Q7L4S7 300 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 LAX1Q8IWV1 398 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 TMEFF1Q8IYR6 380 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 CACTIN-AS1Q8N1I8 211 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 ANKRD53Q8N9V6 530 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 OR2A1Q8NGT9 310 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 C1orf216Q8TAB5 229 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 ASB15Q8WXK1 588 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 SHDQ96IW2 340 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 PRAP1Q96NZ9 151 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 MAPKAP1Q9BPZ7 522 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 OR2B2Q9GZK3 357 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 NMNAT1Q9HAN9 279 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 C3orf14Q9HBI5 128 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 SMURF1Q9HCE7 757 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 CCDC177Q9NQR7 707 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 CLN6Q9NWW5 311 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 TAS2R9Q9NYW1 312 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 CRNNQ9UBG3 495 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-204ENST00000353317 ATP6V1HQ9UI12 483 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 SIT1Q9Y3P8 196 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 KCNE2Q9Y6J6 123 aa8.11□□□□□ -1.11
TRIM55-204ENST00000353317 A0A1W2PR77 199 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 A8MV72 311 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 FFAR1O14842 300 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 LCMT2O60294 686 aaKnown RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 C1GALT1C1LP0DN25 315 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 PCBP3P57721 371 aaKnown RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 YPEL5P62699 121 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF763Q0D2J5 394 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 ELOAQ14241 798 aaKnown RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 PUM1Q14671 1186 aaKnown RBP eCLIP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 PRSS53Q2L4Q9 553 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 PRAMEF13Q5VWM6 474 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 FAM180BQ6P0A1 224 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 NXPE4Q6UWF7 544 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 COMMD6Q7Z4G1 85 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 WDR53Q7Z5U6 358 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms