RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CLPTM1O96005 669 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 MT-ND1P03886 318 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 ARAFP10398 606 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 KLK2P20151 261 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 UQCRC2P22695 453 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 CD1CP29017 333 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 PEBP1P30086 187 aaKnown RBP7.71□□□□□ -1.18
CD44-205ENST00000352818 SSTR2P30874 369 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 CSF2RBP32927 897 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 BCL6P41182 706 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 RPS6KA3P51812 740 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 NR1H2P55055 460 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 EEF1A2Q05639 463 aaKnown RBP7.71□□□□□ -1.18
CD44-205ENST00000352818 GK3PQ14409 553 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 KRT33BQ14525 404 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 AMZ1Q400G9 498 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 LRRC23Q53EV4 343 aaPredicted RBP7.71□□□□□ -1.18
CD44-205ENST00000352818 DCAF12Q5T6F0 453 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 FOXB2Q5VYV0 432 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 SAXO2Q658L1 398 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 OR2T5Q6IEZ7 315 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 TMEM214Q6NUQ4 689 aaKnown RBP7.71□□□□□ -1.18
CD44-205ENST00000352818 TRIM40Q6P9F5 258 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 SHQ1Q6PI26 577 aaKnown RBP7.71□□□□□ -1.18
CD44-205ENST00000352818 TBPL2Q6SJ96 375 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 UBE3DQ7Z6J8 389 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 ADGRF3Q8IZF5 1079 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 C2orf73Q8N5S3 287 aaPredicted RBP7.71□□□□□ -1.18
CD44-205ENST00000352818 MFSD9Q8NBP5 474 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 SRFBP1Q8NEF9 429 aaKnown RBP7.71□□□□□ -1.18
CD44-205ENST00000352818 OR6C4Q8NGE1 309 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 OR2T29Q8NH02 315 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 OR5P2Q8WZ92 322 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 SLC22A18Q96BI1 424 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 NEURL3Q96EH8 262 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 PDXPQ96GD0 296 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 PRAP1Q96NZ9 151 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 SMR3AQ99954 134 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 SLC6A16Q9GZN6 736 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 CLK4Q9HAZ1 481 aaKnown RBP7.71□□□□□ -1.18
CD44-205ENST00000352818 APMAPQ9HDC9 416 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 PRM3Q9NNZ6 103 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 MIEF1Q9NQG6 463 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 GPATCH2Q9NW75 528 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 ADPRHL2Q9NX46 363 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 SCHIP1Q9P0W5 487 aaPredicted RBP7.71□□□□□ -1.18
CD44-205ENST00000352818 TAAR2Q9P1P5 351 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 LRIT1Q9P2V4 623 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 TBC1D29Q9UFV1 150 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 SNX7Q9UNH6 387 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 FAF1Q9UNN5 650 aaPredicted RBP7.71□□□□□ -1.18
CD44-205ENST00000352818 OSGIN2Q9Y236 505 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 PADI2Q9Y2J8 665 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 PLEKHM1Q9Y4G2 1056 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 PCDHGB5Q9Y5G0 923 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 KLK4Q9Y5K2 254 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 DGKBQ9Y6T7 804 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 ANK3Q12955 4377 aaKnown RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 FEZF1A0PJY2 475 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 VGLL3A8MV65 326 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 G3V2T6 193 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 PLOD2O00469 737 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 PDPK1O15530 556 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 TMPRSS11DO60235 418 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 LCMT2O60294 686 aaKnown RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 GUCY1B2O75343 617 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 CEACAM4O75871 244 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 BMP10O95393 424 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 SNAP29O95721 258 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 ALBP02768 609 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 GBAP04062 536 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 FABP3P05413 133 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 TFAP2AP05549 437 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 CHRM5P08912 532 aaPredicted RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 ITGAMP11215 1152 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 F3P13726 295 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 FPR1P21462 350 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 DNAJA1P31689 397 aaKnown RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 RAD23AP54725 363 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 PER3P56645 1201 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 SRP54P61011 504 aaKnown RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 RPS15AP62244 130 aaKnown RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 RELAQ04206 551 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 HYAL2Q12891 473 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 FOXD4Q12950 439 aaPredicted RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 IL18R1Q13478 541 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 KIR2DS3Q14952 304 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 PRSS53Q2L4Q9 553 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 ALG11Q2TAA5 492 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 IQCCQ4KMZ1 466 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.7□□□□□ -1.18
CD44-205ENST00000352818 RNF220Q5VTB9 566 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 TTC23Q5W5X9 447 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 OR4C11Q6IEV9 310 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 MRM1Q6IN84 353 aaKnown RBP7.7□□□□□ -1.18
CD44-205ENST00000352818 ENPP7Q6UWV6 458 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 STK32CQ86UX6 486 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 AMIGO1Q86WK6 493 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 PAQR7Q86WK9 346 aa7.7□□□□□ -1.18
CD44-205ENST00000352818 ZC3H7AQ8IWR0 971 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms