RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 MS4A4EQ96PG1 132 aa12.96□□□□□ -0.33
SMC6-201ENST00000351948 A0A1B0GTW7 788 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 A0A1W2PRG6 482 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 H3BSA7 217 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 MAP4K2Q12851 820 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 ZNF750Q32MQ0 723 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 TMEM236Q5W0B7 351 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 RBM12BQ8IXT5 1001 aaKnown RBP12.96□□□□□ -0.34
SMC6-201ENST00000351948 IQCF1Q8N6M8 205 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 ASB15Q8WXK1 588 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 RSC1A1Q92681 617 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 NAT6Q93015 286 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 TTYH2Q9BSA4 534 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 CUTCQ9NTM9 273 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 ING3Q9NXR8 418 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 GPR52Q9Y2T5 361 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 ASB1Q9Y576 335 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 PCDHGB7Q9Y5F8 929 aa12.96□□□□□ -0.34
SMC6-201ENST00000351948 SSNA1O43805 119 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 TRIM3O75382 744 aaPredicted RBP12.95□□□□□ -0.34
SMC6-201ENST00000351948 CLPXO76031 633 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 SLCO2B1O94956 709 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 MYF5P13349 255 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 IL12AP29459 219 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 NUP62P37198 522 aaPredicted RBP12.95□□□□□ -0.34
SMC6-201ENST00000351948 SMAD2Q15796 467 aaKnown RBP12.95□□□□□ -0.34
SMC6-201ENST00000351948 FCRLBQ6BAA4 426 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 SLC27A4Q6P1M0 643 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 FAM83HQ6ZRV2 1179 aaPredicted RBP12.95□□□□□ -0.34
SMC6-201ENST00000351948 MARCH9Q86YJ5 346 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 C19orf47Q8N9M1 422 aaKnown RBP12.95□□□□□ -0.34
SMC6-201ENST00000351948 OR4K5Q8NGD3 323 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 FRS2Q8WU20 508 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 OSTF1Q92882 214 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 RBP7Q96R05 134 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 P2RY12Q9H244 342 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 C14orf105Q9NVL8 296 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 CCDC182A6NF36 153 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 SPARCP09486 303 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 CDKL1Q00532 357 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 EEF1A2Q05639 463 aaKnown RBP12.95□□□□□ -0.34
SMC6-201ENST00000351948 LINC00471Q8N535 108 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 SLC22A8Q8TCC7 542 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 GNPDA2Q8TDQ7 276 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 OR6C1Q96RD1 312 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 ULBP3Q9BZM4 244 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 CNIH4Q9P003 139 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 SLC23A2Q9UGH3 650 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 TSC22D4Q9Y3Q8 395 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 GVINP1Q7Z2Y8 2422 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 WWP2O00308 870 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 HSD17B1P14061 328 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 NPPBP16860 134 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 EIF2B2P49770 351 aaKnown RBP12.95□□□□□ -0.34
SMC6-201ENST00000351948 ELOAQ14241 798 aaKnown RBP12.95□□□□□ -0.34
SMC6-201ENST00000351948 HACD2Q6Y1H2 254 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 LHFPL3Q86UP9 236 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 SLC5A8Q8N695 610 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 ANKFN1Q8N957 763 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 CD93Q9NPY3 652 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 NANSQ9NR45 359 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 BTNL2Q9UIR0 455 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 ZDBF2Q9HCK1 2354 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 PRAMEF33A0A0G2JMD5 474 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 MAP3K8P41279 467 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 PFN3P60673 137 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 ZP2Q05996 745 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 SYPL1Q16563 259 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 TMEM64Q6YI46 380 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 FGF21Q9NSA1 209 aa12.95□□□□□ -0.34
SMC6-201ENST00000351948 A8MVJ9 347 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 SCRG1O75711 98 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 F10P00742 488 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 RHCEP18577 417 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 HK1P19367 917 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 FOLR3P41439 243 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 RPS6KA3P51812 740 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 KCNAB1Q14722 419 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 LTB4RQ15722 352 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 SGCAQ16586 387 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 RETREG3Q86VR2 466 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 SPATA9Q9BWV2 254 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 QRSL1Q9H0R6 528 aaKnown RBP12.94□□□□□ -0.34
SMC6-201ENST00000351948 MYNNQ9NPC7 610 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 HPF1Q9NWY4 346 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 SERGEFQ9UGK8 458 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 PAIP2BQ9ULR5 123 aaKnown RBP12.94□□□□□ -0.34
SMC6-201ENST00000351948 MAGED1Q9Y5V3 778 aaPredicted RBP12.94□□□□□ -0.34
SMC6-201ENST00000351948 LRRC37AA6NMS7 1700 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 FAM25EA8MYX2 175 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 RNASET2O00584 256 aaKnown RBP12.94□□□□□ -0.34
SMC6-201ENST00000351948 P04436 131 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 IL18R1Q13478 541 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 C1orf53Q5VUE5 145 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 MAVSQ7Z434 540 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 CDRT4Q8N9R6 151 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 BARD1Q99728 777 aaKnown RBP12.94□□□□□ -0.34
SMC6-201ENST00000351948 MTHFD2LQ9H903 347 aaPredicted RBP12.94□□□□□ -0.34
SMC6-201ENST00000351948 TMEM5Q9Y2B1 443 aa12.94□□□□□ -0.34
SMC6-201ENST00000351948 SHROOM3Q8TF72 1996 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms