RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 ZFYVE1Q9HBF4 777 aa14.14□□□□□ -0.15
TRAF3-202ENST00000351691 SDHAF2Q9NX18 166 aa14.14□□□□□ -0.15
TRAF3-202ENST00000351691 EXTL2Q9UBQ6 330 aa14.14□□□□□ -0.15
TRAF3-202ENST00000351691 EXO1Q9UQ84 846 aaKnown RBP14.14□□□□□ -0.15
TRAF3-202ENST00000351691 YIPF1Q9Y548 306 aa14.14□□□□□ -0.15
TRAF3-202ENST00000351691 H3BN98 237 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 AGRPO00253 132 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 GPR171O14626 319 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 SLC16A5O15375 505 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 SOCS5O75159 536 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 PAHP00439 452 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 ELAVL4P26378 380 aaKnown RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 RAE1P78406 368 aaKnown RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 CYP4F8P98187 520 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 ZXDCQ2QGD7 858 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 NHLRC3Q5JS37 347 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 RAET1GQ6H3X3 334 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 FAM151BQ6UXP7 276 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 UBE2R2Q712K3 238 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 WDR53Q7Z5U6 358 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 LURAP1LQ8IV03 231 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 LINC00052Q96N35 136 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 RNF32Q9H0A6 362 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 SEMA3GQ9NS98 782 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 GULP1Q9UBP9 304 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 DNMT3AQ9Y6K1 912 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 TEX13CA0A0J9YWL9 993 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 SMIM30A4D0T7 59 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 A8MXK9 166 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 M0R233 179 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 SLC28A2O43868 658 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 CFDP00746 253 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 TP53P04637 393 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 HIST1H2AGP0C0S8 130 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 HOXB3P14651 431 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 ELK1P19419 428 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 RAB3AP20336 220 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 HIST1H2ADP20671 130 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 DGKGP49619 791 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 DHODHQ02127 395 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 BCL2L1Q07817 233 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 CHIT1Q13231 466 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 SP140Q13342 867 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 PLD1Q13393 1074 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 PGBD2Q6P3X8 592 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 RRM2BQ7LG56 351 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 CLDN19Q8N6F1 224 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 KCT2Q8NC54 265 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 HIST1H2AHQ96KK5 128 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 COQ10AQ96MF6 247 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 HIST1H2AJQ99878 128 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 C7orf50Q9BRJ6 194 aaKnown RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 FUZQ9BT04 418 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 H2AFJQ9BTM1 129 aa14.13□□□□□ -0.15
TRAF3-202ENST00000351691 ZNF436Q9C0F3 470 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 FCF1Q9Y324 198 aaKnown RBP14.13□□□□□ -0.15
TRAF3-202ENST00000351691 CXorf51AA0A1B0GTR3 108 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-202ENST00000351691 C2orf78A6NCI8 922 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 TLX2O43763 284 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-202ENST00000351691 TCRBP04435 133 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 MPC1LP0DKB6 136 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 RPL17P18621 184 aaKnown RBP14.12□□□□□ -0.15
TRAF3-202ENST00000351691 CXCL3P19876 107 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 CHI3L1P36222 383 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-202ENST00000351691 CSKP41240 450 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 LIM2P55344 173 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 DCDC1P59894 354 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 SMAD3P84022 425 aaKnown RBP14.12□□□□□ -0.15
TRAF3-202ENST00000351691 TAP2Q03519 686 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 CSTF1Q05048 431 aaKnown RBP14.12□□□□□ -0.15
TRAF3-202ENST00000351691 STK11Q15831 433 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 ATXN7L2Q5T6C5 722 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-202ENST00000351691 IKBIPQ70UQ0 350 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 MARCH9Q86YJ5 346 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 CMIPQ8IY22 773 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 PM20D2Q8IYS1 436 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 SLAIN1Q8ND83 568 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 OR6C4Q8NGE1 309 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 CDC26Q8NHZ8 85 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 NEIL3Q8TAT5 605 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 ADAMTS19Q8TE59 1207 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 GATAD2BQ8WXI9 593 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 C11orf49Q9H6J7 331 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 HMX1Q9NP08 348 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-202ENST00000351691 CD93Q9NPY3 652 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 ENAMQ9NRM1 1142 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 NUDT15Q9NV35 164 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 TVP23BQ9NYZ1 205 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 RHCGQ9UBD6 479 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 POMT2Q9UKY4 750 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 HRH3Q9Y5N1 445 aa14.12□□□□□ -0.15
TRAF3-202ENST00000351691 SCN5AQ14524 2016 aa14.11□□□□□ -0.15
TRAF3-202ENST00000351691 CARNS1A5YM72 827 aa14.11□□□□□ -0.15
TRAF3-202ENST00000351691 PRODHO43272 600 aa14.11□□□□□ -0.15
TRAF3-202ENST00000351691 SOX14O95416 240 aa14.11□□□□□ -0.15
TRAF3-202ENST00000351691 PRAMEF12O95522 483 aa14.11□□□□□ -0.15
TRAF3-202ENST00000351691 NFATC1O95644 943 aa14.11□□□□□ -0.15
TRAF3-202ENST00000351691 TGM6O95932 706 aa14.11□□□□□ -0.15
TRAF3-202ENST00000351691 IGFBP1P08833 259 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms