RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 KCTD3Q9Y597 815 aa10.09□□□□□ -0.79
CAPN3-203ENST00000349748 SLC9B1P1A6NJY1 282 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 M0QYT0 321 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 LCMT2O60294 686 aaKnown RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 KERAO60938 352 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 ANXA9O76027 345 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 IGFBP1P08833 259 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 TXNP10599 105 aaKnown RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 ZNF8P17098 575 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 FDXRP22570 491 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 HOXA6P31267 233 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 PPT1P50897 306 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 MLLT1Q03111 559 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 BCL2L1Q07817 233 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 IL10RBQ08334 325 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 SGO1Q5FBB7 561 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 TMEM255AQ5JRV8 349 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 B3GNTL1Q67FW5 361 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 PAQR3Q6TCH7 311 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 LAPTM4BQ86VI4 370 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 SIAH3Q8IW03 269 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 LAS2Q8IYD9 372 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 STK40Q8N2I9 435 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 SVBPQ8N300 66 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 ATPAF2Q8N5M1 289 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 OR56A4Q8NGH8 313 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 GATAD2BQ8WXI9 593 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 SLC6A18Q96N87 628 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 MOGAT1Q96PD6 335 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 ABHD1Q96SE0 405 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 SPATA5L1Q9BVQ7 753 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 PIGVQ9NUD9 493 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 C2orf92A0A1B0GVN3 265 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 WNT9AO14904 365 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 B4GALT3O60512 393 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 UBXN7O94888 489 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 GJA1P17302 382 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 PTPN6P29350 595 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 ETV5P41161 510 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 NPBWR1P48145 328 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 RAB5BP61020 215 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 OC90Q02509 493 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 MBTPS1Q14703 1052 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 RNF212Q495C1 297 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 SLC36A2Q495M3 483 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 DHRS7BQ6IAN0 325 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 DPPA2Q7Z7J5 298 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 TMEM17Q86X19 198 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 SPAG16Q8N0X2 631 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 CRYBG2Q8N1P7 616 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 ARRDC1Q8N5I2 433 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 RNF149Q8NC42 400 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 CHST13Q8NET6 341 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 TMEM185AQ8NFB2 350 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 OR10H5Q8NGA6 315 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 STAG3L4Q8TBR4 150 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 C11orf24Q96F05 449 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 ALX4Q9H161 411 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 MROH8Q9H579 483 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 TREM2Q9NZC2 230 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 FKBPLQ9UIM3 349 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 SHROOM3Q8TF72 1996 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 OTOFQ9HC10 1997 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 FXYD6-FXYD2A0A087WZ82 144 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 PRR23D1E9PI22 279 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 FAM227AF5H4B4 570 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 DVL2O14641 736 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 SCAMP2O15127 329 aaKnown RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 ADAMTS4O75173 837 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 GP1BAP07359 652 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 PRSS56P0CW18 603 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 PRR23D2P0DMB1 279 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 HOXB6P17509 224 aaKnown RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 CSF2RBP32927 897 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 MVDP53602 400 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 CRYBA2P53672 197 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 EPHA4P54764 986 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 UBE2IP63279 158 aaKnown RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 KCNJ10P78508 379 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 SPIBQ01892 262 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 LAMTOR4Q0VGL1 99 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 VMACQ2NL98 169 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 UNQ6494/PRO21346Q6UXR6 183 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 CBLL1Q75N03 491 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 PDZD4Q76G19 769 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 RHOUQ7L0Q8 258 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 CCDC117Q8IWD4 279 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 DCUN1D3Q8IWE4 304 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 PROKR2Q8NFJ6 384 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 RPLP0P6Q8NHW5 317 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 RHEBL1Q8TAI7 183 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 NELL1Q92832 810 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 TGIF2Q9GZN2 237 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 RNF32Q9H0A6 362 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 FXYD6Q9H0Q3 95 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 NSUN3Q9H649 340 aaKnown RBP10.08□□□□□ -0.8
CAPN3-203ENST00000349748 SLC25A19Q9HC21 320 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 ZFP57Q9NU63 452 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 TMEM45AQ9NWC5 275 aa10.08□□□□□ -0.8
CAPN3-203ENST00000349748 RPS6KB2Q9UBS0 482 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms