RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 DPTQ07507 201 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 HNRNPA1L2Q32P51 320 aaKnown RBP17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 B3GLCTQ6Y288 498 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 LAPTM4BQ86VI4 370 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 OR8D1Q8WZ84 308 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 RNFT2Q96EX2 444 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 KATNB1Q9BVA0 655 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 SAP130Q9H0E3 1048 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 SYNPO2LQ9H987 977 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 MOV10Q9HCE1 1003 aaKnown RBP17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 ZSCAN32Q9NX65 697 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 REV3LO60673 3130 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 HEATR5BQ9P2D3 2071 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 NCR1O76036 304 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 CPEP16870 476 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 FABP5Q01469 135 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 OSGEPL1Q9H4B0 414 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 SLC35C2Q9NQQ7 365 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 COMMD3Q9UBI1 195 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 ATG4BQ9Y4P1 393 aa17.04■□□□□ 0.32
PTP4A3-202ENST00000349124 DOCK9Q9BZ29 2069 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 MYO10Q9HD67 2058 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 COL4A3Q01955 1670 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 VEGFDO43915 354 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 RB1P06400 928 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 DDX6P26196 483 aaKnown RBP eCLIP17.03■□□□□ 0.323e-6■■□□□ 12.1
PTP4A3-202ENST00000349124 APEX1P27695 318 aaKnown RBP17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 P2RY2P41231 377 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 REEP5Q00765 189 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 ZNF234Q14588 700 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 GPAT3Q53EU6 434 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 FAM46CQ5VWP2 391 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 C18orf63Q68DL7 685 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 TYW3Q6IPR3 259 aaKnown RBP17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 RANGRFQ9HD47 186 aaPredicted RBP17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 WASH6PQ9NQA3 447 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 SF3B6Q9Y3B4 125 aaKnown RBP17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 PLEKHM1Q9Y4G2 1056 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 A0A0B4J293 547 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 IQCMA0A1B0GVH7 501 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 CPSF4LA6NMK7 179 aaKnown RBP17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 PLA2G10O15496 165 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 LGI1O95970 557 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 CLTBP09497 229 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 TCEA2Q15560 299 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 PYDC2Q56P42 97 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 METRNLQ641Q3 311 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 C1orf94Q6P1W5 598 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 TMEM107Q6UX40 140 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 VRK2Q86Y07 508 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 C12orf76Q8N812 135 aaPredicted RBP17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 NLGN4YQ8NFZ3 816 aaPredicted RBP17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 OR4F15Q8NGB8 312 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 RNF31Q96EP0 1072 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 CNRIP1Q96F85 164 aaPredicted RBP17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 WDFY2Q96P53 400 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 FERD3LQ96RJ6 166 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 BBS4Q96RK4 519 aa17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 MBNL1Q9NR56 388 aaKnown RBP17.03■□□□□ 0.32
PTP4A3-202ENST00000349124 A0A1W2PR48 441 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 SLC35F4A4IF30 521 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 LRIT2A6NDA9 550 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 DVL2O14641 736 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 ERGP11308 486 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 WNT4P56705 351 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 SMIM11AP58511 58 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 MRPS15P82914 257 aaKnown RBP17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 MLF2Q15773 248 aaPredicted RBP17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 ZFP69Q49AA0 526 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 ERN2Q76MJ5 926 aaKnown RBP17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 DGLUCYQ7Z3D6 616 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 CXorf40AQ8TE69 158 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 POF1BQ8WVV4 589 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 JPH3Q8WXH2 748 aaPredicted RBP17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 FAM46AQ96IP4 442 aaKnown RBP17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 HDHD5Q9BXW7 423 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 DDX31Q9H8H2 851 aaKnown RBP17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 PELI2Q9HAT8 420 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 VCANP13611 3396 aa17.02■□□□□ 0.32
PTP4A3-202ENST00000349124 A0A0A6YYD5 115 aa17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 SHISA3A0PJX4 238 aa17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 HOXC11O43248 304 aaPredicted RBP17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 TBX19O60806 448 aa17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 WSCD2Q2TBF2 565 aa17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 FAM92BQ6ZTR7 304 aa17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 ATP6V1C2Q8NEY4 427 aa17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 SETD6Q8TBK2 473 aa17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 COX14Q96I36 57 aa17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 MSLNLQ96KJ4 702 aa17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 PRRG3Q9BZD7 231 aa17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 POLMQ9NP87 494 aaPredicted RBP17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 ACSS1Q9NUB1 689 aaPredicted RBP17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 SLC9A8Q9Y2E8 581 aa17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 MRPS23Q9Y3D9 190 aaKnown RBP17.02■□□□□ 0.31
PTP4A3-202ENST00000349124 IL1AP01583 271 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 LIMS3P0CW19 117 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 LIMS4P0CW20 117 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 ACP5P13686 325 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms