RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TIMM29Q9BSF4 260 aa13.1□□□□□ -0.31
TRIM4-201ENST00000349062 FNDC11Q9BVV2 318 aa13.1□□□□□ -0.31
TRIM4-201ENST00000349062 RSPO3Q9BXY4 272 aaPredicted RBP13.1□□□□□ -0.31
TRIM4-201ENST00000349062 WASH6PQ9NQA3 447 aa13.1□□□□□ -0.31
TRIM4-201ENST00000349062 B3GNT3Q9Y2A9 372 aa13.1□□□□□ -0.31
TRIM4-201ENST00000349062 ENPP4Q9Y6X5 453 aa13.1□□□□□ -0.31
TRIM4-201ENST00000349062 SERTM1A2A2V5 107 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 HYAL3O43820 417 aaPredicted RBP13.09□□□□□ -0.31
TRIM4-201ENST00000349062 FCMRO60667 390 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 CCNKO75909 580 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 SLC35G6P0C7Q6 338 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 ITGA2P17301 1181 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 HSD17B2P37059 387 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 EIF2DP41214 584 aaKnown RBP13.09□□□□□ -0.31
TRIM4-201ENST00000349062 TNFRSF4P43489 277 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 XKP51811 444 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 CRISP3P54108 245 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 PTGES3Q15185 160 aaKnown RBP13.09□□□□□ -0.31
TRIM4-201ENST00000349062 MICAQ29983 383 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 SLC44A3Q8N4M1 653 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 FAM3CQ92520 227 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 ZNF607Q96SK3 696 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 ZBTB20Q9HC78 741 aaPredicted RBP13.09□□□□□ -0.31
TRIM4-201ENST00000349062 ANKMY1Q9P2S6 941 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 PCDHGA10Q9Y5H3 936 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 GNB5O14775 395 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 GMFGO60234 142 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 CSNK2A2P19784 350 aaPredicted RBP13.09□□□□□ -0.31
TRIM4-201ENST00000349062 NT5EP21589 574 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 CHRNEQ04844 493 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 NFATC4Q14934 902 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 FAM111BQ6SJ93 734 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 IQCHQ86VS3 1027 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 NUP43Q8NFH3 380 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 FAR1Q8WVX9 515 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 C17orf50Q8WW18 174 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 NACC2Q96BF6 587 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 NEUROD4Q9HD90 331 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 TICRRQ7Z2Z1 1910 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 TRIM64A6NGJ6 449 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 EFCAB9A8MZ26 197 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 FFAR1O14842 300 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 WBP4O75554 376 aaKnown RBP13.09□□□□□ -0.31
TRIM4-201ENST00000349062 CLEC3AO75596 197 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 UGT2B17O75795 530 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 JUNBP17275 347 aaPredicted RBP13.09□□□□□ -0.31
TRIM4-201ENST00000349062 MLIPQ5VWP3 458 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 CAMKMTQ7Z624 323 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 OR2L5Q8NG80 312 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 OR6T1Q8NGN1 323 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 MUL1Q969V5 352 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 AKIP1Q9NQ31 210 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 PRDM7Q9NQW5 492 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 P2RX2Q9UBL9 471 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 KLF15Q9UIH9 416 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 GPR52Q9Y2T5 361 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 PCDHGA3Q9Y5H0 932 aa13.09□□□□□ -0.31
TRIM4-201ENST00000349062 SLC16A6O15403 523 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 TGM1P22735 817 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 RGS1Q08116 209 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 FAM92BQ6ZTR7 304 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 KRT73Q86Y46 540 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 SLC16A11Q8NCK7 471 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 ADAMTS15Q8TE58 950 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 NEURL3Q96EH8 262 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 RDH12Q96NR8 316 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 GAS2L1Q99501 681 aaPredicted RBP13.08□□□□□ -0.32
TRIM4-201ENST00000349062 CHCHD6Q9BRQ6 235 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 LMAN2LQ9H0V9 348 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 DCSTAMPQ9H295 470 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 CNIH4Q9P003 139 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 HCN4Q9Y3Q4 1203 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 TFECO14948 347 aaPredicted RBP13.08□□□□□ -0.32
TRIM4-201ENST00000349062 RGS5O15539 181 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 HCRTR1O43613 425 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 CHRM4P08173 479 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 THEGLP0DJG4 465 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 AKT2P31751 481 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 SHC2P98077 582 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 ST3GAL4Q11206 333 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 EXOSC7Q15024 291 aaKnown RBP13.08□□□□□ -0.32
TRIM4-201ENST00000349062 FAM214AQ32MH5 1076 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 IQCCQ4KMZ1 466 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 AGAP7PQ5VUJ5 663 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 FIGNL1Q6PIW4 674 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 FIGLAQ6QHK4 219 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 IKBIPQ70UQ0 350 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 SHFQ7M4L6 423 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 ASPGQ86U10 573 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 HOMEZQ8IX15 550 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 OR8H2Q8N162 312 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 TCEANCQ8N8B7 351 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 DNAJA3Q96EY1 480 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 METTL2AQ96IZ6 378 aaKnown RBP13.08□□□□□ -0.32
TRIM4-201ENST00000349062 POLR2J3Q9H1A7 115 aaKnown RBP13.08□□□□□ -0.32
TRIM4-201ENST00000349062 DSN1Q9H410 356 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 C14orf119Q9NWQ9 140 aa13.08□□□□□ -0.32
TRIM4-201ENST00000349062 SGK494L7N484 410 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 SEMA7AO75326 666 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 H1F0P07305 194 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms