RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 SFXN5Q8TD22 340 aa14.52□□□□□ -0.08
UPF3B-202ENST00000345865 OR1E3Q8WZA6 343 aa14.52□□□□□ -0.08
UPF3B-202ENST00000345865 KAT2AQ92830 837 aa14.52□□□□□ -0.08
UPF3B-202ENST00000345865 OR7D2Q96RA2 312 aa14.52□□□□□ -0.08
UPF3B-202ENST00000345865 SLC38A1Q9H2H9 487 aa14.52□□□□□ -0.08
UPF3B-202ENST00000345865 KIR3DX1Q9H7L2 352 aa14.52□□□□□ -0.08
UPF3B-202ENST00000345865 TVP23BQ9NYZ1 205 aa14.52□□□□□ -0.08
UPF3B-202ENST00000345865 ZNF624Q9P2J8 865 aaPredicted RBP14.52□□□□□ -0.08
UPF3B-202ENST00000345865 PRUNE2Q8WUY3 3088 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 CCRL2O00421 344 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 KCNJ13O60928 360 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 FHP07954 510 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 CSNK2A2P19784 350 aaPredicted RBP14.52□□□□□ -0.09
UPF3B-202ENST00000345865 CMPK1P30085 196 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 NTSR1P30989 418 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 SOX3P41225 446 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 CD97P48960 835 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 SMIM11AP58511 58 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 BTN3A2P78410 334 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 CHRNEQ04844 493 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 MFSD4BQ5TF39 518 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 CASP12Q6UXS9 341 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 AMIGO1Q86WK6 493 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 AMER2Q8N7J2 671 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 SIMC1Q8NDZ2 872 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 OR8J1Q8NGP2 316 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 ELP4Q96EB1 424 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 GABRG3Q99928 467 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 PLA2G12AQ9BZM1 189 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 KLF15Q9UIH9 416 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 ENTPD4Q9Y227 616 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 SLC9A8Q9Y2E8 581 aa14.52□□□□□ -0.09
UPF3B-202ENST00000345865 TRIOO75962 3097 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 ARHGEF17Q96PE2 2063 aaPredicted RBP14.51□□□□□ -0.09
UPF3B-202ENST00000345865 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 TLX2O43763 284 aaPredicted RBP14.51□□□□□ -0.09
UPF3B-202ENST00000345865 CSO75390 466 aaKnown RBP14.51□□□□□ -0.09
UPF3B-202ENST00000345865 HBQ1P09105 142 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 PORP16435 677 aaPredicted RBP14.51□□□□□ -0.09
UPF3B-202ENST00000345865 HYAL1Q12794 435 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 CEBPEQ15744 281 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 TJAP1Q5JTD0 557 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 C1orf94Q6P1W5 598 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 CD300LDQ6UXZ3 194 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 PLEKHG7Q6ZR37 379 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 RD3Q7Z3Z2 195 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 PAQR7Q86WK9 346 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 VRK2Q86Y07 508 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 KIF18BQ86Y91 864 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 SHISA5Q8N114 240 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 NUP43Q8NFH3 380 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 KBTBD8Q8NFY9 601 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 LCN9Q8WX39 176 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 KLHL6Q8WZ60 621 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 FGF11Q92914 225 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 GIMAP5Q96F15 307 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 PRRC1Q96M27 445 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 OR2M4Q96R27 311 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 TSSK6Q9BXA6 273 aa14.51□□□□□ -0.09
UPF3B-202ENST00000345865 CCDC59Q9P031 241 aaKnown RBP14.51□□□□□ -0.09
UPF3B-202ENST00000345865 A0A0G2JPF8 293 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 HNRNPCL2B2RXH8 293 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 HNRNPCL3B7ZW38 293 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 DNAJB6O75190 326 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 HNRNPCL4P0DMR1 293 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 CSTF2P33240 577 aaKnown RBP eCLIP14.5□□□□□ -0.09
UPF3B-202ENST00000345865 GIPRP48546 466 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 EFNB1P98172 346 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 ALDH6A1Q02252 535 aaKnown RBP14.5□□□□□ -0.09
UPF3B-202ENST00000345865 GINS1Q14691 196 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 ENPP7Q6UWV6 458 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 TRIM73Q86UV7 250 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 SLC22A16Q86VW1 577 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 SLC34A3Q8N130 599 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 OR56A1Q8NGH5 318 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 TRMT61AQ96FX7 289 aaKnown RBP14.5□□□□□ -0.09
UPF3B-202ENST00000345865 TMEM80Q96HE8 168 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 C10orf90Q96M02 699 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 ABCB10Q9NRK6 738 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 TMEM74BQ9NUR3 256 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 A3GALT2U3KPV4 340 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 A0A087WUU8 490 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 WWP2O00308 870 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 EMC8O43402 210 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 FCMRO60667 390 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 GUCY1B2O75343 617 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 SCG5P05408 212 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 MPIP34949 423 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 RHAGQ02094 409 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 NCF4Q15080 339 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 OCLNQ16625 522 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 BHLHB9Q6PI77 547 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 LYSMD2Q8IV50 215 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 CADM3Q8N126 398 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 FAM83FQ8NEG4 500 aaPredicted RBP14.5□□□□□ -0.09
UPF3B-202ENST00000345865 FLVCR1-AS1Q8TAF5 88 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 TSACCQ96A04 125 aaPredicted RBP14.5□□□□□ -0.09
UPF3B-202ENST00000345865 SPATA5L1Q9BVQ7 753 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 PINK1Q9BXM7 581 aa14.5□□□□□ -0.09
UPF3B-202ENST00000345865 NKX2-4Q9H2Z4 354 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms