RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TMEM125Q96AQ2 219 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 MOAP1Q96BY2 351 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 THOC1Q96FV9 657 aaKnown RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 ZNF317Q96PQ6 595 aaPredicted RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 CLMPQ9H6B4 373 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 RMND5AQ9H871 391 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 FAM120CQ9NX05 1096 aaKnown RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 KLHL14Q9P2G3 628 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 ZNF639Q9UID6 485 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 C19orf53Q9UNZ5 99 aaPredicted RBP10.98□□□□□ -0.65
SNCA-202ENST00000345009 SNX8Q9Y5X2 465 aa10.98□□□□□ -0.65
SNCA-202ENST00000345009 COL6A6A6NMZ7 2263 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 TRAV17A0A0B4J275 112 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 FAM234BA2RU67 622 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 GMNCA6NCL1 334 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 OR5H15A6NDH6 313 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 WWP2O00308 870 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 ANKRD28O15084 1053 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 EMC8O43402 210 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 OR2J2O76002 312 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 WDPCPO95876 746 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 PGRP06401 933 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 CT62P0C5K7 136 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 S1PR1P21453 382 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 LSP1P33241 339 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 TRHRP34981 398 aaPredicted RBP10.97□□□□□ -0.65
SNCA-202ENST00000345009 MC3RP41968 323 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 MRPL19P49406 292 aaKnown RBP10.97□□□□□ -0.65
SNCA-202ENST00000345009 TMED10P49755 219 aaKnown RBP10.97□□□□□ -0.65
SNCA-202ENST00000345009 HLCSP50747 726 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 ATP4BP51164 291 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 GNGT1P63211 74 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 DUSP2Q05923 314 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 SQLEQ14534 574 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 VPS26BQ4G0F5 336 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 ZNF385BQ569K4 471 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 TMEM107Q6UX40 140 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 VASH1Q7L8A9 365 aaPredicted RBP10.97□□□□□ -0.65
SNCA-202ENST00000345009 C9orf40Q8IXQ3 194 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 BEST3Q8N1M1 668 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 OR2L13Q8N349 312 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 TRIML2Q8N7C3 387 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 ZNF321PQ8N8H1 164 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 OR7G2Q8NG99 324 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 RFWD2Q8NHY2 731 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 HSPBAP1Q96EW2 488 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 OR52E6Q96RD3 313 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 TMEM120AQ9BXJ8 343 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 WWTR1Q9GZV5 400 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 ZNF223Q9UK11 482 aaPredicted RBP10.97□□□□□ -0.65
SNCA-202ENST00000345009 ERVK-11Q9UQG0 969 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 B3GNT3Q9Y2A9 372 aa10.97□□□□□ -0.65
SNCA-202ENST00000345009 HEMK1Q9Y5R4 338 aaPredicted RBP10.97□□□□□ -0.65
SNCA-202ENST00000345009 NUP214P35658 2090 aaPredicted RBP10.96□□□□□ -0.65
SNCA-202ENST00000345009 A8MVJ9 347 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 ACOX3O15254 700 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 C6orf47O95873 294 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 CBX7O95931 251 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 KRT16P08779 473 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 DRD5P21918 477 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 KRT20P35900 424 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 CD96P40200 585 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 PPICP45877 212 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 CCT3P49368 545 aaKnown RBP10.96□□□□□ -0.65
SNCA-202ENST00000345009 POLR2JP52435 117 aaKnown RBP10.96□□□□□ -0.65
SNCA-202ENST00000345009 PRKAG1P54619 331 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 KCNK10P57789 538 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 RPP38P78345 283 aaKnown RBP10.96□□□□□ -0.65
SNCA-202ENST00000345009 TP53BP2Q13625 1128 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 EXOSC7Q15024 291 aaKnown RBP10.96□□□□□ -0.65
SNCA-202ENST00000345009 EBPQ15125 230 aaKnown RBP10.96□□□□□ -0.65
SNCA-202ENST00000345009 PRSS53Q2L4Q9 553 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 PIGGQ5H8A4 983 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 SPANXN4Q5MJ08 99 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 OR4F3Q6IEY1 312 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 ZCCHC12Q6PEW1 402 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 MSANTD1Q6ZTZ1 278 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 SZRD1Q7Z422 152 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 OR56A1Q8NGH5 318 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 PNPLA2Q96AD5 504 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 MAGED4Q96JG8 741 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 LCORQ96JN0 433 aaPredicted RBP10.96□□□□□ -0.65
SNCA-202ENST00000345009 MARK4Q96L34 752 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 SGCZQ96LD1 299 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 C5orf34Q96MH7 638 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 SLAMF7Q9NQ25 335 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 HPF1Q9NWY4 346 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 LRFN1Q9P244 771 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 BTNL2Q9UIR0 455 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 ANAPC2Q9UJX6 822 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 MRTO4Q9UKD2 239 aaKnown RBP10.96□□□□□ -0.65
SNCA-202ENST00000345009 OR10H1Q9Y4A9 318 aa10.96□□□□□ -0.65
SNCA-202ENST00000345009 PCSK5Q92824 1860 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 UPK1AO00322 258 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 TP53I11O14683 189 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 PRKNO60260 465 aaPredicted RBP10.95□□□□□ -0.66
SNCA-202ENST00000345009 ERN1O75460 977 aaKnown RBP10.95□□□□□ -0.66
SNCA-202ENST00000345009 ABCB1P08183 1280 aaPredicted RBP10.95□□□□□ -0.66
SNCA-202ENST00000345009 NAGAP17050 411 aa10.95□□□□□ -0.66
SNCA-202ENST00000345009 GPX3P22352 226 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms