RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 CARD17Q5XLA6 110 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 SERPINA12Q8IW75 414 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 GDPD1Q8N9F7 314 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 PPTC7Q8NI37 304 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 ZNF230Q9UIE0 474 aaPredicted RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 FAM237AA0A1B0GTK4 181 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 TACR2P21452 398 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 GRB7Q14451 532 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 EOGTQ5NDL2 527 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 TMEM150AQ86TG1 271 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 PLPP5Q8NEB5 264 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 FKTNO75072 461 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 DPEP1P16444 411 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 IMPA1P29218 277 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 VIPR1P32241 457 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 HTRA4P83105 476 aaPredicted RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 GRIK5Q16478 980 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 PKDCCQ504Y2 493 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 CATSPEREQ5SY80 951 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 TMEM53Q6P2H8 277 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 HBEGFQ99075 208 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 TXNL4BQ9NX01 149 aaKnown RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 SCML2Q9UQR0 700 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 PRRC2BQ5JSZ5 2229 aaKnown RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 CEP170Q5SW79 1584 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 FAM221BA6H8Z2 402 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 FAM155AB1AL88 458 aaPredicted RBP16.88■□□□□ 0.29
SMAD4-201ENST00000342988 SOX14O95416 240 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 CRMP1Q14194 572 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 FAM162BQ5T6X4 162 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 SMIM12Q96EX1 92 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 KIAA1210Q9ULL0 1709 aa16.88■□□□□ 0.29
SMAD4-201ENST00000342988 GABRDO14764 452 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 C7P10643 843 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 GLB1P16278 677 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 FCER1GP30273 86 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 TAS2R46P59540 309 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 FLI1Q01543 452 aaPredicted RBP16.87■□□□□ 0.29
SMAD4-201ENST00000342988 OGDHQ02218 1023 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 KCNC3Q14003 757 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 PAQR8Q8TEZ7 354 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 CGREF1Q99674 301 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 PBX4Q9BYU1 374 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 SLC2A11Q9BYW1 496 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 KCNH6Q9H252 994 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 PCGF3Q3KNV8 242 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 TMEM173Q86WV6 379 aaPredicted RBP16.87■□□□□ 0.29
SMAD4-201ENST00000342988 KIAA0319LQ8IZA0 1049 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 SLC35C1Q96A29 364 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 HMCESQ96FZ2 354 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 CRYM-AS1A6NIL9 109 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 IMPDH1P20839 514 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 SOX2P48431 317 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 GPR88Q9GZN0 384 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 PITHD1Q9GZP4 211 aaPredicted RBP16.87■□□□□ 0.29
SMAD4-201ENST00000342988 SLC2A4RGQ9NR83 387 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 A0A1W2PPM1 405 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 PTHP01270 115 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 GCH1P30793 250 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 IL13RA1P78552 427 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 ZNF763Q0D2J5 394 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 BPHLQ86WA6 291 aaPredicted RBP16.87■□□□□ 0.29
SMAD4-201ENST00000342988 CHDHQ8NE62 594 aaPredicted RBP16.87■□□□□ 0.29
SMAD4-201ENST00000342988 DCAF16Q9NXF7 216 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 EVLQ9UI08 416 aaPredicted RBP16.87■□□□□ 0.29
SMAD4-201ENST00000342988 YTHDF2Q9Y5A9 579 aaKnown RBP16.87■□□□□ 0.29
SMAD4-201ENST00000342988 RPS10-NUDT3A0A1W2PQS6 291 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 RPS10P46783 165 aaKnown RBP16.87■□□□□ 0.29
SMAD4-201ENST00000342988 LMF2Q9BU23 707 aaKnown RBP16.87■□□□□ 0.29
SMAD4-201ENST00000342988 LGALS13Q9UHV8 139 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 ACSL6Q9UKU0 697 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 CPQQ9Y646 472 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 LOC102725191A0A1B0GVB3 256 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 CTDNEP1O95476 244 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 SLC51AQ86UW1 340 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 ZNF416Q9BWM5 594 aa16.87■□□□□ 0.29
SMAD4-201ENST00000342988 EDDM13A0A1B0GTR0 161 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 ARHGEF15O94989 841 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 PPM1JQ5JR12 505 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 TSTD2Q5T7W7 516 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 NOXA1Q86UR1 476 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 RNF130Q86XS8 419 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 UHRF1Q96T88 793 aaPredicted RBP16.86■□□□□ 0.29
SMAD4-201ENST00000342988 SPATA31A6Q5VVP1 1343 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 MYO3AQ8NEV4 1616 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 A0A1W2PP18 115 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 CEBPZOSA8MTT3 80 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 PKLRP30613 574 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 NPAS3Q8IXF0 933 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 PRR18Q8N4B5 295 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 CMSS1Q9BQ75 279 aaKnown RBP16.86■□□□□ 0.29
SMAD4-201ENST00000342988 OR2M5A3KFT3 312 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 B4GALT2O60909 372 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 DEFA4P12838 97 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 DUSP7Q16829 419 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 SCPEP1Q9HB40 452 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 SHOX2O60902 331 aaPredicted RBP16.86■□□□□ 0.29
SMAD4-201ENST00000342988 TK1P04183 234 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 FHP07954 510 aa16.86■□□□□ 0.29
SMAD4-201ENST00000342988 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms