RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 OR56A3Q8NH54 315 aa14.26□□□□□ -0.13
BRAT1-201ENST00000340611 SELENOMQ8WWX9 145 aa14.26□□□□□ -0.13
BRAT1-201ENST00000340611 SPATA9Q9BWV2 254 aa14.26□□□□□ -0.13
BRAT1-201ENST00000340611 DPY30Q9C005 99 aa14.26□□□□□ -0.13
BRAT1-201ENST00000340611 IFT46Q9NQC8 304 aa14.26□□□□□ -0.13
BRAT1-201ENST00000340611 CUEDC1Q9NWM3 386 aaPredicted RBP14.26□□□□□ -0.13
BRAT1-201ENST00000340611 A0A1W2PPC4 97 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 A0A1W2PQ09 198 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 IGLV3-19P01714 112 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 EBLN1P0CF75 366 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 HSMCR30P0CW71 290 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 RFX4Q33E94 735 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 CCDC71Q8IV32 467 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-201ENST00000340611 LIX1Q8N485 282 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 CAMKK1Q8N5S9 505 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 TMCO6Q96DC7 493 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 OR52E6Q96RD3 313 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 APOL4Q9BPW4 351 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 MKLN1Q9UL63 735 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 RNF6Q9Y252 685 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 ZNF175Q9Y473 711 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 LYVE1Q9Y5Y7 322 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 LRP4O75096 1905 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 A0A096LPI6 279 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 OR5F1O95221 314 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 TEAD1P28347 426 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 C21orf33P30042 268 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-201ENST00000340611 CXCL12P48061 93 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 AANATQ16613 207 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 KIF18BQ86Y91 864 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 NRROSQ86YC3 692 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 DCUN1D3Q8IWE4 304 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 LRRC56Q8IYG6 542 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-201ENST00000340611 RAD51AP1Q96B01 352 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 COQ8BQ96D53 544 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 PYURFQ96I23 114 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 C12orf57Q99622 126 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 ACPTQ9BZG2 426 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 PPA2Q9H2U2 334 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 ASXL3Q9C0F0 2248 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 KCNE1BA0A087WTH5 132 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 TRAV20A0A0B4J274 112 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 OR2A25A4D2G3 310 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 K7ESF4 209 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 SAP18O00422 153 aaKnown RBP14.25□□□□□ -0.13
BRAT1-201ENST00000340611 RAB25P57735 213 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 KIAA1024LP59773 190 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 MVKQ03426 396 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 FZD2Q14332 565 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 MAD2L1BPQ15013 274 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-201ENST00000340611 RPE65Q16518 533 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 RUNDC3AQ59EK9 446 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 ARMCX4Q5H9R4 360 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 Q6ZPB1 254 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-201ENST00000340611 ABI3BPQ7Z7G0 1075 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 DENND6BQ8NEG7 585 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 SLC30A2Q9BRI3 323 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 TIMM29Q9BSF4 260 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 COPS4Q9BT78 406 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 MENTQ9BUN1 341 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 SLAMF7Q9NQ25 335 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 PDP1Q9P0J1 537 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-201ENST00000340611 ZNF624Q9P2J8 865 aaPredicted RBP14.25□□□□□ -0.13
BRAT1-201ENST00000340611 TNFRSF10DQ9UBN6 386 aa14.25□□□□□ -0.13
BRAT1-201ENST00000340611 PNMA8CA0A1B0GUJ8 204 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 FAM25EA8MYX2 175 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 UGT2B10P36537 528 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 BNC1Q01954 994 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 RPA4Q13156 261 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 UAP1L1Q3KQV9 507 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 CAPN13Q6MZZ7 669 aaPredicted RBP14.24□□□□□ -0.13
BRAT1-201ENST00000340611 SHQ1Q6PI26 577 aaKnown RBP14.24□□□□□ -0.13
BRAT1-201ENST00000340611 CLDN23Q96B33 292 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 FRMD6Q96NE9 622 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 CAMK1GQ96NX5 476 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 NELL2Q99435 816 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 INPP5KQ9BT40 448 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 C1orf109Q9NX04 203 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 CCL27Q9Y4X3 112 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 PEX16Q9Y5Y5 336 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 FEZF1A0PJY2 475 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 SDC3O75056 442 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 ZNF217O75362 1048 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 ETHE1O95571 254 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 HOXB3P14651 431 aaPredicted RBP14.24□□□□□ -0.13
BRAT1-201ENST00000340611 SMSP52788 366 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 PRRT3Q5FWE3 981 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 ZC3H12BQ5HYM0 836 aaKnown RBP14.24□□□□□ -0.13
BRAT1-201ENST00000340611 ZBTB37Q5TC79 503 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 ATG16L2Q8NAA4 619 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 OR52H1Q8NGJ2 320 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 OR52E1Q8NGJ3 308 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 SPHK1Q9NYA1 384 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 ACSL5Q9ULC5 683 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 HRH3Q9Y5N1 445 aa14.24□□□□□ -0.13
BRAT1-201ENST00000340611 PCDHGA12O60330 932 aa14.23□□□□□ -0.13
BRAT1-201ENST00000340611 PEX14O75381 377 aa14.23□□□□□ -0.13
BRAT1-201ENST00000340611 SEC22BO75396 215 aa14.23□□□□□ -0.13
BRAT1-201ENST00000340611 ERN1O75460 977 aaKnown RBP14.23□□□□□ -0.13
BRAT1-201ENST00000340611 TNFSF8P32971 234 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms