RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 RPL36Q9Y3U8 105 aaKnown RBP11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 NUMA1Q14980 2115 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 PCP4L1A6NKN8 68 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 CASKO14936 926 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 PLOD3O60568 738 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 SLC2A2P11168 524 aaPredicted RBP11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 PIPP12273 146 aaPredicted RBP11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 HSD3B1P14060 373 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 TIMP2P16035 220 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 ITGB7P26010 798 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 HSD3B2P26439 372 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 SNRPGP62308 76 aaKnown RBP11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 C1DQ13901 141 aaKnown RBP11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 QPRTQ15274 297 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 GPR19Q15760 415 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 RNASE12Q5GAN4 147 aaKnown RBP11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 TIGD4Q8IY51 512 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 SIMC1Q8NDZ2 872 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 PROKR2Q8NFJ6 384 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 OR8D4Q8NGM9 314 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 OR8J1Q8NGP2 316 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 OR5AR1Q8NGP9 310 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 OTULINQ96BN8 352 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 PDXPQ96GD0 296 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 LMLNQ96KR4 655 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 ZNF558Q96NG5 402 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 WACQ9BTA9 647 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 MKRN2Q9H000 416 aaKnown RBP11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 MAN2C1Q9NTJ4 1040 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 ACOXLQ9NUZ1 547 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 PPIL1Q9Y3C6 166 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 DYRK1BQ9Y463 629 aa11.29□□□□□ -0.6
CCDC144CP-201ENST00000340196 A0A1W2PQ72 361 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 TRIM77I1YAP6 450 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 OLFM2O95897 454 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 SYPP08247 313 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 PTX3P26022 381 aaPredicted RBP11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 PKLRP30613 574 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 AGFG1P52594 562 aaKnown RBP11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 DDI2Q5TDH0 399 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 TPGS2Q68CL5 300 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 PLET1Q6UQ28 207 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 FAM83HQ6ZRV2 1179 aaPredicted RBP11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 ANKRD53Q8N9V6 530 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 TMEM145Q8NBT3 493 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 BBS1Q8NFJ9 593 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 SLC5A11Q8WWX8 675 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 ZG16BQ96DA0 208 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 TCEAL4Q96EI5 215 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 RNFT2Q96EX2 444 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 WDFY2Q96P53 400 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 MYNNQ9NPC7 610 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 HSPB11Q9Y547 144 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 ZC3H12DA2A288 527 aaKnown RBP11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 ISM1B1AKI9 464 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 ZNF197O14709 1029 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 LANCL1O43813 399 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 MPZL2O60487 215 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 ZNF780AO75290 641 aaPredicted RBP11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 SLC2A10O95528 541 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 IFNA14P01570 189 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 LAG3P18627 525 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 ALAS2P22557 587 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 VIPR1P32241 457 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 SLC6A11P48066 632 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 GAS1P54826 345 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 TEKQ02763 1124 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 FAPQ12884 760 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 NCF4Q15080 339 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 ZNF284Q2VY69 593 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 SDE2Q6IQ49 451 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 KIAA1161Q6NSJ0 714 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 ASB18Q6ZVZ8 466 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 DDX53Q86TM3 631 aaKnown RBP11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 LAPTM4BQ86VI4 370 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 LILRB1Q8NHL6 650 aaPredicted RBP11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 MSLNLQ96KJ4 702 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 KCTD7Q96MP8 289 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 MYO10Q9HD67 2058 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 TM7SF3Q9NS93 570 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 SIRT3Q9NTG7 399 aaPredicted RBP11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 TDP1Q9NUW8 608 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 MAT2BQ9NZL9 334 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 SLC25A13Q9UJS0 675 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 KCNE3Q9Y6H6 103 aa11.28□□□□□ -0.6
CCDC144CP-201ENST00000340196 TMPRSS11DO60235 418 aa11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 ELFN1P0C7U0 828 aa11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 CELP19835 753 aa11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 POU3F3P20264 500 aaPredicted RBP11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 BUD31P41223 144 aaPredicted RBP11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 MAP2K3P46734 347 aa11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 PRLHRP49683 370 aa11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 MAPK12P53778 367 aa11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 KCNC3Q14003 757 aa11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 TOR1AIP1Q5JTV8 583 aa11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 SLC30A6Q6NXT4 461 aa11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 XKRXQ6PP77 449 aa11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 NR2C2APQ86WQ0 139 aa11.27□□□□□ -0.6
CCDC144CP-201ENST00000340196 FAM109AQ8N4B1 249 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms