RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 NUDT21O43809 227 aaKnown RBP20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 ZIC2O95409 532 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 ITGAMP11215 1152 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 PDX1P52945 283 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 ISL1P61371 349 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 ZNF691Q5VV52 312 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 MLIPQ5VWP3 458 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 Q6ZPB1 254 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 RASSF5Q8WWW0 418 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 YIPF3Q9GZM5 350 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 PRDM9Q9NQV7 894 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 NTMQ9P121 344 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 MKLN1Q9UL63 735 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 TMEM184BQ9Y519 407 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 UNC13CQ8NB66 2214 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 A8MU76 341 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 AGXTP21549 392 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 GSSP48637 474 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 ARRB1P49407 418 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 EPHA4P54764 986 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 DUSP5Q16690 384 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 ATAD3BQ5T9A4 648 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 FHL5Q5TD97 284 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 MMABQ96EY8 250 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 ERVMER34-1Q9H9K5 563 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 PTGFRNQ9P2B2 879 aa20.98■□□□□ 0.95
PDLIM2-203ENST00000339162 A0A0G2JPF8 293 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 HNRNPCL2B2RXH8 293 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 HNRNPCL3B7ZW38 293 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 ASNA1O43681 348 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 HNRNPCL4P0DMR1 293 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 ETS2P15036 469 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 MAGEA8P43361 318 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 NR1H2P55055 460 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 IL5RAQ01344 420 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 SLC13A2Q13183 592 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 GNA13Q14344 377 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 NDUFA9Q16795 377 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 PRICKLE4Q2TBC4 344 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 FAM214AQ32MH5 1076 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 CCNJQ5T5M9 372 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 PMS2CLQ68D20 193 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 CDC73Q6P1J9 531 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 MAMSTRQ6ZN01 415 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 VRK2Q86Y07 508 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 CHDHQ8NE62 594 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 CNIH3Q8TBE1 160 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 SGCDQ92629 289 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 TMIGD2Q96BF3 282 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 ALPK1Q96QP1 1244 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 IER2Q9BTL4 223 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 NMNAT1Q9HAN9 279 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 CAPN10Q9HC96 672 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 CTPS2Q9NRF8 586 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 GIN1Q9NXP7 522 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 MAT2BQ9NZL9 334 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 EPHA6Q9UF33 1036 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 C19orf53Q9UNZ5 99 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 TRBV4-1A0A0J9YWV2 114 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 PABPC4LP0CB38 370 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 ACP2P11117 423 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 GNSP15586 552 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 GLB1P16278 677 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 CSF2RBP32927 897 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 LIMS1P48059 325 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 CSTF1Q05048 431 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 PIN1Q13526 163 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 FGD3Q5JSP0 725 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 LAIR2Q6ISS4 152 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 TAGAPQ8N103 731 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 FAM192AQ9GZU8 254 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 MAU2Q9Y6X3 613 aa20.97■□□□□ 0.95
PDLIM2-203ENST00000339162 PI4KAP42356 2102 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 A8MVJ9 347 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 TGFBR3LH3BV60 316 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 FRS3O43559 492 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 TPST2O60704 377 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 UGT2B11O75310 529 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 TDGF1P13385 188 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 EEF1B2P24534 225 aaKnown RBP20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 BTG2P78543 158 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 MGAT2Q10469 447 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 NPRL3Q12980 569 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 PRAMEF17Q5VTA0 474 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 OR6T1Q8NGN1 323 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 PIGKQ92643 395 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 UBE2FQ969M7 185 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 GTPBP3Q969Y2 492 aaKnown RBP20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 RNF31Q96EP0 1072 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 ZNF285Q96NJ3 590 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 TRNT1Q96Q11 434 aaKnown RBP20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 PRR14Q9BWN1 585 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 RAB33BQ9H082 229 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 DNAAF2Q9NVR5 837 aaKnown RBP20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 GMPPBQ9Y5P6 360 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 CSNK1G3Q9Y6M4 447 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 RP1P56715 2156 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 CCDC163A0A0D9SF12 145 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 AGRPO00253 132 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 LAMTOR5O43504 91 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms