RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 KRT16P08779 473 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 UQCRC2P22695 453 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 TRHRP34981 398 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 SOX18P35713 384 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 TRPC1P48995 793 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 CYB561P49447 251 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 PRIM2P49643 509 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 HLCSP50747 726 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 NR0B1P51843 470 aaKnown RBP11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 HBA1P69905 142 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 PSPHP78330 225 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 TP53BP2Q13625 1128 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 VPS26BQ4G0F5 336 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 ZCCHC12Q6PEW1 402 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 ZNF621Q6ZSS3 439 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 SZRD1Q7Z422 152 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 PIGWQ7Z7B1 504 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 ANKRD46Q86W74 232 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 FUNDC1Q8IVP5 155 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 GPALPP1Q8IXQ4 340 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 CLECL1Q8IZS7 167 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 BEST3Q8N1M1 668 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 TEX19Q8NA77 164 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 OR9I1Q8NGQ6 314 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 SFXN5Q8TD22 340 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 TSPEARQ8WU66 669 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 ASB15Q8WXK1 588 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 ADIPOR1Q96A54 375 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 SPDL1Q96EA4 605 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 HSPBAP1Q96EW2 488 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 LCORQ96JN0 433 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 CCT8L2Q96SF2 557 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 NPAS2Q99743 824 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 CXorf36Q9H7Y0 433 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 ANKRA2Q9H9E1 313 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 FOLH1BQ9HBA9 442 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 SAR1AQ9NR31 198 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 ZCCHC3Q9NUD5 404 aaKnown RBP11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 PLA2G3Q9NZ20 509 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 VPS4AQ9UN37 437 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 GPR55Q9Y2T6 319 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 NUP210LQ5VU65 1888 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 WDFY3Q8IZQ1 3526 aa11.03□□□□□ -0.64
SPTLC1-202ENST00000337841 SCN2AQ99250 2005 aa11.02□□□□□ -0.64
SPTLC1-202ENST00000337841 A0A1W2PP18 115 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 OR5H15A6NDH6 313 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 K7EM74 188 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 NR5A2O00482 541 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 RFXANKO14593 260 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC22A2O15244 555 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 ACOX3O15254 700 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 ERN1O75460 977 aaKnown RBP11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 ANP32DO95626 131 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 SNRPB2P08579 225 aaKnown RBP11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 NAGAP17050 411 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 SOAT1P35610 550 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 CD96P40200 585 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 FOXK1P85037 733 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 ZNF155Q12901 538 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 DUSP8Q13202 625 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 LY6DQ14210 128 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 MAPRE2Q15555 327 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 TIGD2Q4W5G0 525 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 C16orf47Q6ZP98 133 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 C6orf120Q7Z4R8 191 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 DND1Q8IYX4 353 aaKnown RBP11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 CDRT4Q8N9R6 151 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 SIMC1Q8NDZ2 872 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 GOT1L1Q8NHS2 421 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 VPS33AQ96AX1 596 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 FAM120BQ96EK7 910 aaKnown RBP11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 VSTM2LQ96N03 204 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 MS4A4EQ96PG1 132 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 RASL10BQ96S79 203 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 ITPAQ9BY32 194 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 ZNF385DQ9H6B1 395 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 ZBTB20Q9HC78 741 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 SIRT3Q9NTG7 399 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 LRFN1Q9P244 771 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 MRTO4Q9UKD2 239 aaKnown RBP11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 FAF1Q9UNN5 650 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 ERVK-11Q9UQG0 969 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 ARL2BPQ9Y2Y0 163 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 NDUFAF1Q9Y375 327 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 OR10H1Q9Y4A9 318 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 PCSK5Q92824 1860 aa11.02□□□□□ -0.65
SPTLC1-202ENST00000337841 CACNA1BQ00975 2339 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 FRG2CA6NGY1 282 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 A8MVJ9 347 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 ANGPT2O15123 496 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 MAN1A2O60476 641 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 SHOX2O60902 331 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 PSMG1O95456 288 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 FAM107AO95990 144 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 PDGFAP04085 211 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 ALOX5P09917 674 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 CD46P15529 392 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 GABRA3P34903 492 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 KRT20P35900 424 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms