RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 DDX5P17844 614 aaKnown RBP8.32□□□□□ -1.08
SNCA-201ENST00000336904 GABRB1P18505 474 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 CD79BP40259 229 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 LIMS1P48059 325 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 TPMTP51580 245 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 CDC42P60953 191 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 C10orf62Q5T681 223 aaPredicted RBP8.32□□□□□ -1.08
SNCA-201ENST00000336904 DCDC5Q6ZRR9 648 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 CCDC80Q76M96 950 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 TRIM48Q8IWZ4 208 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 SVOPQ8N4V2 548 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 FAM83FQ8NEG4 500 aaPredicted RBP8.32□□□□□ -1.08
SNCA-201ENST00000336904 OR2L5Q8NG80 312 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 MCFD2Q8NI22 146 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 DYNC2LI1Q8TCX1 351 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 HTRA1Q92743 480 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 TBC1D20Q96BZ9 403 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 ZNF354BQ96LW1 612 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 SLC6A18Q96N87 628 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 UCK2Q9BZX2 261 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 EVA1BQ9NVM1 165 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 REV1Q9UBZ9 1251 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 CYP8B1Q9UNU6 501 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 ALPK2Q86TB3 2170 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 SLC35F4A4IF30 521 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 GNB5O14775 395 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 TBX1O43435 398 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 IGFBP4P22692 258 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 CMPK1P30085 196 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 KCNC4Q03721 635 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 ERV3-1Q14264 604 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 ZNF311Q5JNZ3 666 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 FBXO42Q6P3S6 717 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 FIGNL1Q6PIW4 674 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 NUDT18Q6ZVK8 323 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 C16orf62Q7Z3J2 963 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 ALDH16A1Q8IZ83 802 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 ELSPBP1Q96BH3 223 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 TRMT61AQ96FX7 289 aaKnown RBP8.32□□□□□ -1.08
SNCA-201ENST00000336904 ZNF607Q96SK3 696 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 A4GALTQ9NPC4 353 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 MAN2C1Q9NTJ4 1040 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 QPCTLQ9NXS2 382 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 ARID1BQ8NFD5 2236 aaPredicted RBP8.32□□□□□ -1.08
SNCA-201ENST00000336904 ABCA7Q8IZY2 2146 aa8.32□□□□□ -1.08
SNCA-201ENST00000336904 ZC3H12DA2A288 527 aaKnown RBP8.31□□□□□ -1.08
SNCA-201ENST00000336904 TRIM64BA6NI03 449 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 PRICKLE3O43900 615 aaPredicted RBP8.31□□□□□ -1.08
SNCA-201ENST00000336904 F3P13726 295 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 CPN2P22792 545 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 ACVR2AP27037 513 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 MAOBP27338 520 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 PPP2R1BP30154 601 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 UGT2B15P54855 530 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 TAS2R41P59536 307 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 RUNX2Q13950 521 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 ALG11Q2TAA5 492 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 OR2G6Q5TZ20 316 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 FCRLBQ6BAA4 426 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 SLC30A6Q6NXT4 461 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 Q6ZSR6 202 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 DENND4AQ7Z401 1863 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 NKAIN4Q8IVV8 208 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 SMAP2Q8WU79 429 aaPredicted RBP8.31□□□□□ -1.08
SNCA-201ENST00000336904 MRPL38Q96DV4 380 aaKnown RBP8.31□□□□□ -1.08
SNCA-201ENST00000336904 DNAJA3Q96EY1 480 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 QRFPRQ96P65 431 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 CNPPD1Q9BV87 410 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 FAIM2Q9BWQ8 316 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 SLIRPQ9GZT3 109 aaKnown RBP8.31□□□□□ -1.08
SNCA-201ENST00000336904 PCBD2Q9H0N5 130 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 SEMA4GQ9NTN9 838 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 IRAK4Q9NWZ3 460 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 TOR4AQ9NXH8 423 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 MSRAQ9UJ68 235 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 CD207Q9UJ71 328 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 MAPRE3Q9UPY8 281 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.31□□□□□ -1.08
SNCA-201ENST00000336904 CABIN1Q9Y6J0 2220 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 FAM183AA6NL82 134 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 ZAR1LA6NP61 321 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 CLDN25C9JDP6 229 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 PROM1O43490 865 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 SLC2A10O95528 541 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 PRG2P13727 222 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 SHC2P98077 582 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 GINS1Q14691 196 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 CASP12Q6UXS9 341 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 PRICKLE2Q7Z3G6 844 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 KIF18BQ86Y91 864 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 GALNT12Q8IXK2 581 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 GHDCQ8N2G8 530 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 TBC1D19Q8N5T2 526 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 MYDGFQ969H8 173 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 SLC38A4Q969I6 547 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 NACC2Q96BF6 587 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 SIGLEC11Q96RL6 698 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 TIMM29Q9BSF4 260 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 TTTY10Q9BZA0 68 aa8.31□□□□□ -1.08
SNCA-201ENST00000336904 ANKMY1Q9P2S6 941 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms