RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 DDX5P17844 614 aaKnown RBP11.82□□□□□ -0.52
LIMK1-201ENST00000336180 NT5EP21589 574 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 VBP1P61758 197 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 STXBP1P61764 594 aaKnown RBP11.82□□□□□ -0.52
LIMK1-201ENST00000336180 TARDBPQ13148 414 aaKnown RBP eCLIP11.82□□□□□ -0.52
LIMK1-201ENST00000336180 AQP6Q13520 282 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 FIGNL1Q6PIW4 674 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 TRIM69Q86WT6 500 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 SNX29P2Q8IUI4 249 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 ESX1Q8N693 406 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 FAM131CQ96AQ9 280 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 TBC1D20Q96BZ9 403 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 POLMQ9NP87 494 aaPredicted RBP11.82□□□□□ -0.52
LIMK1-201ENST00000336180 C8orf4Q9NR00 106 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 IMPAD1Q9NX62 359 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 DNAJC27Q9NZQ0 273 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 NDRG4Q9ULP0 352 aaKnown RBP11.82□□□□□ -0.52
LIMK1-201ENST00000336180 PCDHGA2Q9Y5H1 932 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 PCDHGA10Q9Y5H3 936 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 UNC13CQ8NB66 2214 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 A0A0A6YYC8 382 aaPredicted RBP11.82□□□□□ -0.52
LIMK1-201ENST00000336180 FAM170BA6NMN3 283 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 I3L1I5 382 aaPredicted RBP11.82□□□□□ -0.52
LIMK1-201ENST00000336180 FGF17O60258 216 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 DCNP07585 359 aaKnown RBP11.82□□□□□ -0.52
LIMK1-201ENST00000336180 CDH3P22223 829 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 CNR2P34972 360 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 KCNAB1Q14722 419 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 PTGES3Q15185 160 aaKnown RBP11.82□□□□□ -0.52
LIMK1-201ENST00000336180 CLEC12AQ5QGZ9 265 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 C10orf62Q5T681 223 aaPredicted RBP11.82□□□□□ -0.52
LIMK1-201ENST00000336180 KIAA0895LQ68EN5 471 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 TSSK4Q6SA08 328 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 DGAT2L6Q6ZPD8 337 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 ZDHHC1Q8WTX9 485 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 ELP4Q96EB1 424 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 GPA33Q99795 319 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 LRRC61Q9BV99 259 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 ALOXE3Q9BYJ1 711 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 TPK1Q9H3S4 243 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 RNF167Q9H6Y7 350 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 ZNF556Q9HAH1 456 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 P2RX2Q9UBL9 471 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 FBXL21Q9UKT6 434 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 CES1P1Q9UKY3 287 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 HEBP2Q9Y5Z4 205 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 ZDBF2Q9HCK1 2354 aa11.82□□□□□ -0.52
LIMK1-201ENST00000336180 PNMA8CA0A1B0GUJ8 204 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 MED26O95402 600 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 GLULP15104 373 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 CSNK1EP49674 416 aaKnown RBP11.81□□□□□ -0.52
LIMK1-201ENST00000336180 RBBP4Q09028 425 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 RBM48Q5RL73 367 aaKnown RBP11.81□□□□□ -0.52
LIMK1-201ENST00000336180 MRM1Q6IN84 353 aaKnown RBP11.81□□□□□ -0.52
LIMK1-201ENST00000336180 C16orf62Q7Z3J2 963 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 IQCHQ86VS3 1027 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 GRAMD2AQ8IUY3 354 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 TBC1D19Q8N5T2 526 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 SLC7A13Q8TCU3 470 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 THAP11Q96EK4 314 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 KLHDC7BQ96G42 594 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 EPYCQ99645 322 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 APOL4Q9BPW4 351 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 PRAMEF26H0Y7S4 382 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 HRKO00198 91 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 OXSR1O95747 527 aaPredicted RBP11.81□□□□□ -0.52
LIMK1-201ENST00000336180 CH25HO95992 272 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 GKN3PP0CG01 181 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 CDK4P11802 303 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 PCSK2P16519 638 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 FUT1P19526 365 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 TEAD1P28347 426 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 SEPHS1P49903 392 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 GFERP55789 205 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 NCS1P62166 190 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 ABATP80404 500 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 COL19A1Q14993 1142 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 ADPRMQ3LIE5 342 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 TMEM35AQ53FP2 167 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 PRSS58Q8IYP2 241 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 OR13F1Q8NGS4 319 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 FAR1Q8WVX9 515 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 RERGQ96A58 199 aaPredicted RBP11.81□□□□□ -0.52
LIMK1-201ENST00000336180 FSCN3Q9NQT6 498 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 WSB2Q9NYS7 404 aaPredicted RBP11.81□□□□□ -0.52
LIMK1-201ENST00000336180 CNIH4Q9P003 139 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 MAU2Q9Y6X3 613 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 SPTY2D1-AS1A0A0U1RR47 76 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 OR2A25A4D2G3 310 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 A8MU76 341 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 CT62P0C5K7 136 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 ITGAMP11215 1152 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 CHMP24386 653 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 AHRP35869 848 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 ALDH6A1Q02252 535 aaKnown RBP11.81□□□□□ -0.52
LIMK1-201ENST00000336180 CSNK1A1LQ8N752 337 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 TTLQ8NG68 377 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 SLC35A4Q96G79 324 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 MAP3K3Q99759 626 aa11.81□□□□□ -0.52
LIMK1-201ENST00000336180 NT5DC2Q9H857 520 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms