RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 A0A0G2JPF8 293 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 HNRNPCL2B2RXH8 293 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 HNRNPCL3B7ZW38 293 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 CASC3O15234 703 aaKnown RBP16.66■□□□□ 0.26
LRCH3-201ENST00000334859 FRS3O43559 492 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 RNGTTO60942 597 aaKnown RBP16.66■□□□□ 0.26
LRCH3-201ENST00000334859 ASGR2P07307 311 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 HNRNPCL4P0DMR1 293 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 CMPK1P30085 196 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 TAS2R41P59536 307 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 ALDH6A1Q02252 535 aaKnown RBP16.66■□□□□ 0.26
LRCH3-201ENST00000334859 ENPP2Q13822 863 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 NCF4Q15080 339 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 SYT14P1Q58G82 188 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 TJAP1Q5JTD0 557 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 SLC48A1Q6P1K1 146 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 PAQR6Q6TCH4 344 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 MORN4Q8NDC4 146 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 PRR14Q9BWN1 585 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 POLR2J2Q9GZM3 115 aaKnown RBP16.66■□□□□ 0.26
LRCH3-201ENST00000334859 FGF22Q9HCT0 170 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 WBP1LQ9NX94 342 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 AQP9O43315 295 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 PRICKLE3O43900 615 aaPredicted RBP16.66■□□□□ 0.26
LRCH3-201ENST00000334859 F3P13726 295 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 MPIP34949 423 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 OCLNQ16625 522 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 ZNF311Q5JNZ3 666 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 LINC00471Q8N535 108 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 MOAP1Q96BY2 351 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 OR7D2Q96RA2 312 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 APOOQ9BUR5 198 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 C1QTNF7Q9BXJ2 289 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 PINK1Q9BXM7 581 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 ASPNQ9BXN1 380 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 POLDIP3Q9BY77 421 aaKnown RBP16.66■□□□□ 0.26
LRCH3-201ENST00000334859 CPNE5Q9HCH3 593 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 APOBEC3BQ9UH17 382 aaKnown RBP16.66■□□□□ 0.26
LRCH3-201ENST00000334859 PAIP2BQ9ULR5 123 aaKnown RBP16.66■□□□□ 0.26
LRCH3-201ENST00000334859 PCDHGB6Q9Y5F9 930 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 PNMA8CA0A1B0GUJ8 204 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 HBQ1P09105 142 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 PSMA1P25786 263 aaKnown RBP16.65■□□□□ 0.26
LRCH3-201ENST00000334859 MAGEA8P43361 318 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 GIPRP48546 466 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 MAN2A2P49641 1150 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 SNAPC1Q16533 368 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 ITPRIPL2Q3MIP1 535 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 ACSM5Q6NUN0 579 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 SRFBP1Q8NEF9 429 aaKnown RBP16.65■□□□□ 0.26
LRCH3-201ENST00000334859 NUP43Q8NFH3 380 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 KAT2AQ92830 837 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 EGLN3Q9H6Z9 239 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 TBC1D3DA0A087WVF3 549 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 TBC1D3IA0A087WXS9 549 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 TBC1D3EA0A087X179 549 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 TBC1D3KA0A087X1G2 549 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 TBC1D3FA6NER0 549 aaPredicted RBP16.65■□□□□ 0.26
LRCH3-201ENST00000334859 TBC1D3LB9A6J9 549 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 WWP2O00308 870 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 CTDSP2O14595 271 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 EMC8O43402 210 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 TBC1D3HP0C7X1 549 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 STXBP1P61764 594 aaKnown RBP16.65■□□□□ 0.26
LRCH3-201ENST00000334859 BTN3A2P78410 334 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 LTB4RQ15722 352 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 LIPKQ5VXJ0 399 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 TBC1D3GQ6DHY5 549 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 TBC1D3CQ6IPX1 549 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 C1orf94Q6P1W5 598 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 CD300LDQ6UXZ3 194 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 C16orf62Q7Z3J2 963 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 TBC1D3Q8IZP1 549 aaPredicted RBP16.65■□□□□ 0.26
LRCH3-201ENST00000334859 FAM26EQ8N5C1 309 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 NANOGP1Q8N7R0 232 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 OR4E2Q8NGC2 313 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 OR9Q1Q8NGQ5 310 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 LCN9Q8WX39 176 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 FAM210AQ96ND0 272 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 PLA2G12AQ9BZM1 189 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 KLHL25Q9H0H3 589 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 C3orf14Q9HBI5 128 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 SACM1LQ9NTJ5 587 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 SEC14L4Q9UDX3 406 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 CES1P1Q9UKY3 287 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 UGT2A1Q9Y4X1 527 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 ZNF780BQ9Y6R6 833 aa16.65■□□□□ 0.26
LRCH3-201ENST00000334859 PRR19A6NJB7 356 aa16.64■□□□□ 0.25
LRCH3-201ENST00000334859 CPSF4LA6NMK7 179 aaKnown RBP16.64■□□□□ 0.25
LRCH3-201ENST00000334859 RGS5O15539 181 aa16.64■□□□□ 0.25
LRCH3-201ENST00000334859 PLRG1O43660 514 aaKnown RBP16.64■□□□□ 0.25
LRCH3-201ENST00000334859 APOL3O95236 402 aa16.64■□□□□ 0.25
LRCH3-201ENST00000334859 RAB36O95755 333 aa16.64■□□□□ 0.25
LRCH3-201ENST00000334859 ALPPP05187 535 aa16.64■□□□□ 0.25
LRCH3-201ENST00000334859 SMSP52788 366 aa16.64■□□□□ 0.25
LRCH3-201ENST00000334859 CHRNEQ04844 493 aa16.64■□□□□ 0.25
LRCH3-201ENST00000334859 CDC20Q12834 499 aa16.64■□□□□ 0.25
LRCH3-201ENST00000334859 COL9A2Q14055 689 aaPredicted RBP16.64■□□□□ 0.25
LRCH3-201ENST00000334859 DGLUCYQ7Z3D6 616 aa16.64■□□□□ 0.25
LRCH3-201ENST00000334859 VRK2Q86Y07 508 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms