RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 MFAP4P55083 255 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 SCAND1P57086 179 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 RAP1AP62834 184 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF484Q5JVG2 852 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 AGAP6Q5VW22 663 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 NCEH1Q6PIU2 408 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF438Q7Z4V0 828 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 PIM3Q86V86 326 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 DBF4BQ8NFT6 615 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR4F15Q8NGB8 312 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR6K2Q8NGY2 324 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR6N2Q8NGY6 317 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR2T27Q8NH04 317 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 TSEN15Q8WW01 171 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 PRRC1Q96M27 445 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 AGAP4Q96P64 663 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 TGM7Q96PF1 710 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 TMEM106CQ9BVX2 250 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 SPG21Q9NZD8 308 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 ENPP5Q9UJA9 477 aa5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 DRG1Q9Y295 367 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-201ENST00000334218 FABP2P12104 132 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 MAMSTRQ6ZN01 415 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ABHD11Q8NFV4 315 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 PAGE5Q96GU1 130 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 CASD1Q96PB1 797 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR1A1Q9P1Q5 309 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 KCNG2Q9UJ96 466 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 MROH6A6NGR9 719 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 GPR37O15354 613 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 P2RX6O15547 441 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 UPK1BO75841 260 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 RPS3AP61247 264 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 GRB10Q13322 594 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TOB2Q14106 344 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 FGFBP1Q14512 234 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 SNRNP35Q16560 246 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR5M10Q6IEU7 315 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 USP45Q70EL2 814 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 KLBQ86Z14 1044 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 POGLUT1Q8NBL1 392 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR6C4Q8NGE1 309 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 COA7Q96BR5 231 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ATG4CQ96DT6 458 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 CLIC6Q96NY7 704 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 CSPG4P5Q96PW8 444 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 COPS8Q99627 209 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ITPAQ9BY32 194 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 PARD6GQ9BYG4 376 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 RPF1Q9H9Y2 349 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 EMC7Q9NPA0 242 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 LANCL2Q9NS86 450 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 CEP152O94986 1710 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 GRIN2DO15399 1336 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 CCL15-CCL14A0A0B4J2E2 113 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 LOC102723971A0A1B0GUV8 181 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 M0QYV0 167 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 UGDHO60701 494 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC6A8P48029 635 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 GEMP55040 296 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TAF13Q15543 124 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 GLRX5Q86SX6 157 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 C10orf126Q8N4M7 172 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF248Q8NDW4 579 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 GMCL1P1Q8NEA9 526 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 C14orf79Q96F83 325 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 FBXL18Q96ME1 805 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF382Q96SR6 550 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 MGST2Q99735 147 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 GSX1Q9H4S2 264 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 NRIP3Q9NQ35 241 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TAS2R16Q9NYV7 291 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC22A14Q9Y267 594 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 HCFC1P51610 2035 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 SGPL1O95470 568 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 MMP3P08254 477 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 CDK8P49336 464 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 DNASE1L3Q13609 305 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 P2RY14Q15391 338 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 DHCR24Q15392 516 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 DOK7Q18PE1 504 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 CCBE1Q6UXH8 406 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TMEM135Q86UB9 458 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 C19orf47Q8N9M1 422 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 POC1AQ8NBT0 407 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC35F5Q8WV83 523 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 FCRL2Q96LA5 508 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF670Q9BS34 389 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 PRKAG3Q9UGI9 489 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 RNF112Q9ULX5 631 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZDHHC9Q9Y397 364 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 CTDSP2O14595 271 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 LRG1P02750 347 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ABHD2P08910 425 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ARP10275 920 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 RAC2P15153 192 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 AMD1P17707 334 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC14A2Q15849 920 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 CYP27C1Q4G0S4 372 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR13F1Q8NGS4 319 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms