RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ARSIQ5FYB1 569 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 SLC36A4Q6YBV0 504 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 SMPDL3AQ92484 453 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 IL17FQ96PD4 163 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 KCNK12Q9HB15 430 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 NEUROD4Q9HD90 331 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 SLC23A1Q9UHI7 598 aa22.29■■□□□ 1.16
TSKU-201ENST00000333090 PRAMEF27A3QJZ7 478 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 XPAP23025 273 aaPredicted RBP22.28■■□□□ 1.16
TSKU-201ENST00000333090 TRMT11Q7Z4G4 463 aaKnown RBP22.28■■□□□ 1.16
TSKU-201ENST00000333090 KIF18BQ86Y91 864 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 TBC1D19Q8N5T2 526 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 PLA2G15Q8NCC3 412 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 SERHL2Q9H4I8 314 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 TRDV1A0A1B0GX56 115 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 SNTNA6NMZ2 147 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 PLOD3O60568 738 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 CELP19835 753 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 PKLRP30613 574 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 LRRC32Q14392 662 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 CD200R1LQ6Q8B3 271 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 METAP1DQ6UB28 335 aaPredicted RBP22.28■■□□□ 1.16
TSKU-201ENST00000333090 CD300LDQ6UXZ3 194 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 TRAPPC5Q8IUR0 188 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 ANKK1Q8NFD2 765 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 OR6T1Q8NGN1 323 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 AKAP1Q92667 903 aaKnown RBP eCLIP22.28■■□□□ 1.162e-6■■■■□ 20.7
TSKU-201ENST00000333090 KCNJ15Q99712 375 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 SIRT3Q9NTG7 399 aaPredicted RBP22.28■■□□□ 1.16
TSKU-201ENST00000333090 TRPC4Q9UBN4 977 aa22.28■■□□□ 1.16
TSKU-201ENST00000333090 EXOSC1Q9Y3B2 195 aaKnown RBP22.28■■□□□ 1.16
TSKU-201ENST00000333090 NR2F1P10589 423 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 SLC6A11P48066 632 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 WDR45BQ5MNZ6 344 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 CLEC12AQ5QGZ9 265 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 TEX47Q8TBZ9 253 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 TTC9Q92623 222 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 SAP130Q9H0E3 1048 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 SPG21Q9NZD8 308 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 CHD7Q9P2D1 2997 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 C2orf92A0A1B0GVN3 265 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 TIMP2P16035 220 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 CCT3P49368 545 aaKnown RBP22.27■■□□□ 1.16
TSKU-201ENST00000333090 MAP4K2Q12851 820 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 DUSP6Q16828 381 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 KIAA1211LQ6NV74 962 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 TMEM25Q86YD3 366 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 TM4SF18Q96CE8 201 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 F2RL3Q96RI0 385 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 MTG2Q9H4K7 406 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 HMX1Q9NP08 348 aaPredicted RBP22.27■■□□□ 1.16
TSKU-201ENST00000333090 ISYNA1Q9NPH2 558 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 PLAGL1Q9UM63 463 aa22.27■■□□□ 1.16
TSKU-201ENST00000333090 NEDD8-MDP1E9PL57 170 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 LEFTY2O00292 366 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 SOD2P04179 222 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 CSTF1Q05048 431 aaKnown RBP22.26■■□□□ 1.15
TSKU-201ENST00000333090 MINDY4Q4G0A6 757 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 SLC27A4Q6P1M0 643 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 C1orf94Q6P1W5 598 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 B3GLCTQ6Y288 498 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 TECPR1Q7Z6L1 1165 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 MORN4Q8NDC4 146 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 UBE2E3Q969T4 207 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 HDHD2Q9H0R4 259 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 PAK6Q9NQU5 681 aaPredicted RBP22.26■■□□□ 1.15
TSKU-201ENST00000333090 MRPS18AQ9NVS2 196 aaKnown RBP22.26■■□□□ 1.15
TSKU-201ENST00000333090 AHSPQ9NZD4 102 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 P2RX2Q9UBL9 471 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 SLC9A8Q9Y2E8 581 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 CDH10Q9Y6N8 788 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 IRGMA1A4Y4 181 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 CD8B2A6NJW9 211 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 CD8BP10966 210 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 SLC1A3P43003 542 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 LRRC56Q8IYG6 542 aaPredicted RBP22.26■■□□□ 1.15
TSKU-201ENST00000333090 OR4F15Q8NGB8 312 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 MAP6Q96JE9 813 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 OR51I1Q9H343 314 aa22.26■■□□□ 1.15
TSKU-201ENST00000333090 GABRPO00591 440 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 WEE1P30291 646 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 AGFG1P52594 562 aaKnown RBP22.25■■□□□ 1.15
TSKU-201ENST00000333090 MZT2AQ6P582 158 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 SLC38A6Q8IZM9 456 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 FBXO15Q8NCQ5 510 aaPredicted RBP22.25■■□□□ 1.15
TSKU-201ENST00000333090 OR8H1Q8NGG4 311 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 SORCS1Q8WY21 1168 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 PHF21AQ96BD5 680 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 ITM2BQ9Y287 266 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 GOLGA4Q13439 2230 aaKnown RBP22.25■■□□□ 1.15
TSKU-201ENST00000333090 CH25HO95992 272 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 ELFN1P0C7U0 828 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 BUD31P41223 144 aaPredicted RBP22.25■■□□□ 1.15
TSKU-201ENST00000333090 MLLT1Q03111 559 aaPredicted RBP22.25■■□□□ 1.15
TSKU-201ENST00000333090 ENTPD8Q5MY95 495 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 PRAMEF14Q5SWL7 426 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 PRAMEF13Q5VWM6 474 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 OTULINQ96BN8 352 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 PRR14Q9BWN1 585 aa22.25■■□□□ 1.15
TSKU-201ENST00000333090 TAS2R7Q9NYW3 318 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms