RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ATG4BQ9Y4P1 393 aa5.85□□□□□ -1.47
SMG1-201ENST00000330588 PCDHGB3Q9Y5G1 929 aa5.85□□□□□ -1.47
SMG1-201ENST00000330588 BSNQ9UPA5 3926 aa5.85□□□□□ -1.47
SMG1-201ENST00000330588 GCN1Q92616 2671 aaKnown RBP5.85□□□□□ -1.47
SMG1-201ENST00000330588 A0A1B0GVC2 190 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 A0A1W2PR48 441 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 GOLGA6L10A6NI86 522 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 A8MUA0 341 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 CAPN14A8MX76 684 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 NPIPB8E9PQR5 432 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 RTCAO00442 366 aaKnown RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 PEX1O43933 1283 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 TMPRSS11DO60235 418 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 LDB3O75112 727 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 EEDO75530 441 aaKnown RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 OR2J2O76002 312 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 GLSO94925 669 aaPredicted RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 ETHE1O95571 254 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 AIFM1O95831 613 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 IGHG3P01860 377 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 ATP1B1P05026 303 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 HOXD4P09016 255 aaPredicted RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 CCDC159P0C7I6 412 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 PIK3R1P27986 724 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 HSD17B3P37058 310 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 TMED10P49755 219 aaKnown RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 MEOX1P50221 254 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 SMSP52788 366 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 SLC37A1P57057 533 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 KCNK10P57789 538 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 DNAJB13P59910 316 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 LCP2Q13094 533 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 DDX39BQ13838 428 aaKnown RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 SLC29A2Q14542 456 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 MAPKAPK3Q16644 382 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 ZNF791Q3KP31 576 aaPredicted RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 ANKRD39Q53RE8 183 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 SPIN4Q56A73 249 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 LCE5AQ5TCM9 118 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 TTC19Q6DKK2 380 aaPredicted RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 GALNT18Q6P9A2 607 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 RNF111Q6ZNA4 994 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 SH2D5Q6ZV89 423 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 SLC29A4Q7RTT9 530 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 CLNKQ7Z7G1 428 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 SLC22A16Q86VW1 577 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 JAZF1Q86VZ6 243 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 CHERPQ8IWX8 916 aaKnown RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 ZNF441Q8N8Z8 693 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 FAM76AQ8TAV0 307 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 ABHD4Q8TB40 342 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 FAM57AQ8TBR7 257 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 PAQR8Q8TEZ7 354 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 CHTF18Q8WVB6 975 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 ITLN2Q8WWU7 325 aaPredicted RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 NTNG2Q96CW9 530 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 C11orf24Q96F05 449 aaPredicted RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 SENP5Q96HI0 755 aaPredicted RBP5.84□□□□□ -1.47
SMG1-201ENST00000330588 FAIM2Q9BWQ8 316 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 OR8D2Q9GZM6 311 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 ELOVL6Q9H5J4 265 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 CXorf21Q9HAI6 301 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 GP6Q9HCN6 339 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 CHST11Q9NPF2 352 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 KLHL1Q9NR64 748 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 SACM1LQ9NTJ5 587 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 EHD3Q9NZN3 535 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 CNIH4Q9P003 139 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 SLAMF8Q9P0V8 285 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 MCM8Q9UJA3 840 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 PSME2Q9UL46 239 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 GRID1Q9ULK0 1009 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 ERVK-11Q9UQG0 969 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 PCDHA9Q9Y5H5 950 aa5.84□□□□□ -1.47
SMG1-201ENST00000330588 ARHGAP10A1A4S6 786 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 TRIM64CA6NLI5 447 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 MANBAO00462 879 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 PRRG2O14669 202 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 TFECO14948 347 aaPredicted RBP5.84□□□□□ -1.48
SMG1-201ENST00000330588 PRKNO60260 465 aaPredicted RBP5.84□□□□□ -1.48
SMG1-201ENST00000330588 OR10H2O60403 315 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 DLX3O60479 287 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 BCAS2O75934 225 aaPredicted RBP5.84□□□□□ -1.48
SMG1-201ENST00000330588 OR6B1O95007 311 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 NADKO95544 446 aaPredicted RBP5.84□□□□□ -1.48
SMG1-201ENST00000330588 ESRRBO95718 433 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 F10P00742 488 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 HPXP02790 462 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 FAM153BP0C7A2 387 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 RNF224P0DH78 156 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 NAT2P11245 290 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 NAGAP17050 411 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 TNNI3P19429 210 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 CD247P20963 164 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 SERPINB3P29508 390 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 CRHR1P34998 444 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 PTGER4P35408 488 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 SOX3P41225 446 aa5.84□□□□□ -1.48
SMG1-201ENST00000330588 CCT5P48643 541 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms