RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ZFAND2BQ8WV99 257 aa13.33□□□□□ -0.28
CTHRC1-201ENST00000330295 RILPQ96NA2 401 aa13.33□□□□□ -0.28
CTHRC1-201ENST00000330295 ALOXE3Q9BYJ1 711 aa13.33□□□□□ -0.28
CTHRC1-201ENST00000330295 ZNF696Q9H7X3 374 aa13.33□□□□□ -0.28
CTHRC1-201ENST00000330295 CNOT10Q9H9A5 744 aaKnown RBP13.33□□□□□ -0.28
CTHRC1-201ENST00000330295 EML4Q9HC35 981 aaKnown RBP13.33□□□□□ -0.28
CTHRC1-201ENST00000330295 MRPS33Q9Y291 106 aaKnown RBP13.33□□□□□ -0.28
CTHRC1-201ENST00000330295 OARD1Q9Y530 152 aa13.33□□□□□ -0.28
CTHRC1-201ENST00000330295 KCNE2Q9Y6J6 123 aa13.33□□□□□ -0.28
CTHRC1-201ENST00000330295 A0A1W2PP18 115 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 CDC7O00311 574 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 SNX4O95219 450 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 ETHE1O95571 254 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 GMPRP36959 345 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 GZMKP49863 264 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 NUDT6P53370 316 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 RAB38P57729 211 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 CSHL1Q14406 222 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 ZNF460Q14592 562 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 UAP1Q16222 522 aaPredicted RBP13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 CDKL4Q5MAI5 379 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 BICRALQ6AI39 1079 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 OR2A2Q6IF42 318 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 ENPP6Q6UWR7 440 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 MBOAT1Q6ZNC8 495 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 PACS2Q86VP3 889 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 GPSM1Q86YR5 675 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 WFDC8Q8IUA0 241 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 OR56A3Q8NH54 315 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 CTHRC1Q96CG8 243 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 MCMBPQ9BTE3 642 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 CAPS2Q9BXY5 557 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 CAB39LQ9H9S4 337 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 NMRAL1Q9HBL8 299 aa13.32□□□□□ -0.28
CTHRC1-201ENST00000330295 LOC100289279A0A1B0GTE1 492 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 PLOD2O00469 737 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 PHGDHO43175 533 aaKnown RBP13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 H2AFYO75367 372 aaKnown RBP13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 CGAP01215 116 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 INHBAP08476 426 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 NPPBP16860 134 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 AHRP35869 848 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 MSH2P43246 934 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 KIR2DL2P43627 348 aaPredicted RBP13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 SCTRP47872 440 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 PGGT1BP53609 377 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 BTN3A2P78410 334 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 STX4Q12846 297 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 TSNQ15631 228 aaKnown RBP13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 SBSNQ6UWP8 590 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 P4HA3Q7Z4N8 544 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 CNPY4Q8N129 248 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 ZNF610Q8N9Z0 462 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 STAG3L4Q8TBR4 150 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 ANKRD49Q8WVL7 239 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 MRRFQ96E11 262 aaKnown RBP13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 C11orf24Q96F05 449 aaPredicted RBP13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 ZNF845Q96IR2 970 aaPredicted RBP13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 NPLQ9BXD5 320 aaPredicted RBP13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 ACSS3Q9H6R3 686 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 MANSC1Q9H8J5 431 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 NINJ2Q9NZG7 142 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 RNF112Q9ULX5 631 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 ACOT9Q9Y305 439 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 RNF115Q9Y4L5 304 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 WNK1Q9H4A3 2382 aa13.31□□□□□ -0.28
CTHRC1-201ENST00000330295 A0A087WUV0 522 aaPredicted RBP13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 CCDC189A1A4V9 331 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 HCRTR2O43614 444 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 CTNSO60931 367 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 VENTXO95231 258 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 CD8BP10966 210 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 SERPINB9P50453 376 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 SIRPAP78324 504 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 LSM11P83369 360 aaKnown RBP eCLIP13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 ZKSCAN8Q15776 578 aaPredicted RBP13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 PPP1R3AQ16821 1122 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 FAM83EQ2M2I3 478 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 PGGHGQ32M88 737 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 LGSNQ5TDP6 509 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 MROH9Q5TGP6 573 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 SULT1C3Q6IMI6 304 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 KLC3Q6P597 504 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 THOC6Q86W42 341 aaKnown RBP13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 TRPV3Q8NET8 790 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 SLC5A11Q8WWX8 675 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 GCDHQ92947 438 aaPredicted RBP13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 PYCR2Q96C36 320 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 AIF1LQ9BQI0 150 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 TRAF4Q9BUZ4 470 aaPredicted RBP13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 NTMT1Q9BV86 223 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 AICDAQ9GZX7 198 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 SPNS1Q9H2V7 528 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 ALG2Q9H553 416 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 CD274Q9NZQ7 290 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 DLGAP4Q9Y2H0 992 aa13.3□□□□□ -0.28
CTHRC1-201ENST00000330295 KMT2CQ8NEZ4 4911 aaKnown RBP13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 SYCE1LA8MT33 242 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 TP53I11O14683 189 aa13.29□□□□□ -0.28
CTHRC1-201ENST00000330295 CLOCKO15516 846 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms