RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 EQTNQ9NQ60 294 aa9.55□□□□□ -0.88
VIPAS39-201ENST00000327028 ACTR3BQ9P1U1 418 aa9.55□□□□□ -0.88
VIPAS39-201ENST00000327028 ERVK-19Q9WJR5 959 aa9.55□□□□□ -0.88
VIPAS39-201ENST00000327028 CLCA3PQ9Y6N3 262 aa9.55□□□□□ -0.88
VIPAS39-201ENST00000327028 DCDC2BA2VCK2 349 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 H0YHG0 523 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 HRKO00198 91 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 HMGN4O00479 90 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 STAMBPO95630 424 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 DDAH2O95865 285 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 CLPSP04118 112 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 UMODP07911 640 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 ARAFP10398 606 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 KPNB1Q14974 876 aaKnown RBP9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 ZNF630Q2M218 657 aaPredicted RBP9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 SFT2D3Q587I9 215 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 FAAH2Q6GMR7 532 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 LCN8Q6JVE9 175 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 CDC73Q6P1J9 531 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 SLC2A12Q8TD20 617 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 C16orf58Q96GQ5 468 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 OR7D2Q96RA2 312 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 TRIM15Q9C019 465 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 NRSN2Q9GZP1 204 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 ASCL3Q9NQ33 180 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 EGFL7Q9UHF1 273 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 BCAP29Q9UHQ4 241 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 SAGE2PA6NJ88 616 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 A8MUA0 341 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 A8MUI8 341 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 C21orf140B9A014 251 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 GSTA4O15217 222 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 DXOO77932 396 aaKnown RBP9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 IGHEP01854 428 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 IGKV3-11P04433 115 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 SSTR4P31391 388 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 ACTR3P61158 418 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 ELF3P78545 371 aaPredicted RBP9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 EEF1A2Q05639 463 aaKnown RBP9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 ZNF155Q12901 538 aaPredicted RBP9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 VEZF1Q14119 521 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 DHFR2Q86XF0 187 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 PROSER1Q86XN7 944 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 SLC30A8Q8IWU4 369 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 ZNF615Q8N8J6 731 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 CDRT4Q8N9R6 151 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 MORN4Q8NDC4 146 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 OR5D16Q8NGK9 328 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 HOXB13Q92826 284 aaPredicted RBP9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 SENP5Q96HI0 755 aaPredicted RBP9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 YIPF4Q9BSR8 244 aa9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 HEMK1Q9Y5R4 338 aaPredicted RBP9.54□□□□□ -0.88
VIPAS39-201ENST00000327028 LOC102723996A0A087X1L8 192 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 CXCR6O00574 342 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 TERTO14746 1132 aaKnown RBP9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 AGR2O95994 175 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 OR12D1P0DN82 309 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 ACP2P11117 423 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 NCK1P16333 377 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 TCN2P20062 427 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 ATP6V1B2P21281 511 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 SOX11P35716 441 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 POLE2P56282 527 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 DNASE1L3Q13609 305 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 CCNIQ14094 377 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 CPEB2Q7Z5Q1 589 aaKnown RBP9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 BHLHE22Q8NFJ8 381 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 FBXO30Q8TB52 745 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 ZNF721Q8TF20 911 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 JADE3Q92613 823 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 RAB8BQ92930 207 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 MAL2Q969L2 176 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 VSTM2LQ96N03 204 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 LMF2Q9BU23 707 aaKnown RBP9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 OR8D2Q9GZM6 311 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 OR10A5Q9H207 317 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 FOLH1BQ9HBA9 442 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 GIN1Q9NXP7 522 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 P2RX2Q9UBL9 471 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 TCFL5Q9UL49 500 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 DUXAA6NLW8 204 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 GMNNO75496 209 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 ALOX5P09917 674 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 MAP3K8P41279 467 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 EMDP50402 254 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 SLC37A1P57057 533 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 CDK6Q00534 326 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 CAMK2BQ13554 666 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 SCARB2Q14108 478 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 RTP5Q14D33 572 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 METTL25Q8N6Q8 603 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 NFKBIDQ8NI38 313 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 ADAMTS15Q8TE58 950 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 FIG4Q92562 907 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 NCLNQ969V3 563 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 STACQ99469 402 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 WDR77Q9BQA1 342 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 GPR87Q9BY21 358 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 GORASP2Q9H8Y8 452 aa9.53□□□□□ -0.88
VIPAS39-201ENST00000327028 COPS7AQ9UBW8 275 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms