RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SNRPD2P62316 118 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 RHAGQ02094 409 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 EEF1A2Q05639 463 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 IRF3Q14653 427 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 IKBIPQ70UQ0 350 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 MTSS1LQ765P7 747 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 VRK2Q86Y07 508 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 OR4N5Q8IXE1 308 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 OR51G2Q8NGK0 314 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 OR2L2Q8NH16 312 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 EFHD2Q96C19 240 aaPredicted RBP12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 SPATA5L1Q9BVQ7 753 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 C11orf54Q9H0W9 315 aaPredicted RBP12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC35C2Q9NQQ7 365 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 A3GALT2U3KPV4 340 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 FAM47E-STBD1D6RA91 191 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 ZNF670-ZNF695F2Z2N8 137 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 PGRMC2O15173 223 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 EIF2S1P05198 315 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 HOXB3P14651 431 aaPredicted RBP12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 GNSP15586 552 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 CLDN2P57739 230 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 SNAP47Q5SQN1 464 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 KRT74Q7RTS7 529 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 ASCC1Q8N9N2 400 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 PROKR2Q8NFJ6 384 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 ADAMTS15Q8TE58 950 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 LMLNQ96KR4 655 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 KLHL31Q9H511 634 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 ANAPC1Q9H1A4 1944 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 CLTBP09497 229 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 MAN2A2P49641 1150 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 KHKP50053 298 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 WNT4P56705 351 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 CSTF1Q05048 431 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 TGM3Q08188 693 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 KLHL22Q53GT1 634 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 PIP5KL1Q5T9C9 394 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 LCN1P1Q5VSP4 162 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 MLIPQ5VWP3 458 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 CCDC80Q76M96 950 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 DGLUCYQ7Z3D6 616 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 Q8N402 240 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 SMG7Q92540 1137 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 FRMD6Q96NE9 622 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 SAP130Q9H0E3 1048 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 OR51V1Q9H2C8 321 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 CERS4Q9HA82 394 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 FKBP14Q9NWM8 211 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 TRPM6Q9BX84 2022 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 ARHGEF9O43307 516 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 DPM1O60762 260 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 B4GALT2O60909 372 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 BMPR1AP36894 532 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 MC3RP41968 323 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 ANXA11P50995 505 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 C21orf58P58505 322 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 PSPHP78330 225 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 IDNKQ5T6J7 187 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 MEDAGQ5VYS4 303 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 SAXO2Q658L1 398 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 PSRC1Q6PGN9 363 aaPredicted RBP12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 ERN2Q76MJ5 926 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 NLRP8Q86W28 1048 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 ANKK1Q8NFD2 765 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 SETD7Q8WTS6 366 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 ZG16BQ96DA0 208 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 ZNF582Q96NG8 517 aaPredicted RBP12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 SECISBP2Q96T21 854 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 SAGE1Q9NXZ1 904 aa12.16□□□□□ -0.46
HMGCS1-201ENST00000325110 C1QTNF3-AMACRE9PGA6 284 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 HPGDSO60760 199 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 CERS1P27544 350 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 BSGP35613 385 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 CD79BP40259 229 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 IL12RB1P42701 662 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 CRYBB2P43320 205 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC9A3P48764 834 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 GPR68Q15743 365 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 TJAP1Q5JTD0 557 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 C18orf63Q68DL7 685 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 OR4C11Q6IEV9 310 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 LCTLQ6UWM7 567 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 SPRED2Q7Z698 418 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 ABI3BPQ7Z7G0 1075 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 KLBQ86Z14 1044 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 NRSN1Q8IZ57 195 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 NANOGP1Q8N7R0 232 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 NEIL3Q8TAT5 605 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 AP3S1Q92572 193 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 GPA33Q99795 319 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 MRPS30Q9NP92 439 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 FZD3Q9NPG1 666 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 REV1Q9UBZ9 1251 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 KCNE3Q9Y6H6 103 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 HYKKA2RU49 373 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 ZNF860A6NHJ4 632 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 KIAA0355O15063 1070 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC31A1O15431 190 aa12.15□□□□□ -0.46
HMGCS1-201ENST00000325110 ALPPP05187 535 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms