RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PRAMEF4O60810 478 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 IFNGP01579 166 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 OPN1LWP04000 364 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 HOXA9P31269 272 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 SOX3P41225 446 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 DCDC1P59894 354 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 ARF3P61204 181 aaPredicted RBP10.39□□□□□ -0.75
TOP3A-201ENST00000321105 EMX1Q04741 257 aaPredicted RBP10.39□□□□□ -0.75
TOP3A-201ENST00000321105 COX10Q12887 443 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 NFATC3Q12968 1075 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 LSAMPQ13449 338 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 PRAMEF9Q5VWM5 478 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 METRNLQ641Q3 311 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 OAFQ86UD1 273 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 C10orf111Q8N326 155 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 AMER3Q8N944 861 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 AVL9Q8NBF6 648 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 MRPL38Q96DV4 380 aaKnown RBP10.39□□□□□ -0.75
TOP3A-201ENST00000321105 C11orf24Q96F05 449 aaPredicted RBP10.39□□□□□ -0.75
TOP3A-201ENST00000321105 RDH12Q96NR8 316 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 SECISBP2Q96T21 854 aaKnown RBP10.39□□□□□ -0.75
TOP3A-201ENST00000321105 ZNF385DQ9H6B1 395 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 CD93Q9NPY3 652 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 TAAR2Q9P1P5 351 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 KLHL42Q9P2K6 505 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 CRNNQ9UBG3 495 aaPredicted RBP10.39□□□□□ -0.75
TOP3A-201ENST00000321105 TNFRSF10DQ9UBN6 386 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 CLDN24A6NM45 220 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 CSTAP01040 98 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 GADD45AP24522 165 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 GRK6P43250 576 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 MASP1P48740 699 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 ARRB1P49407 418 aaPredicted RBP10.39□□□□□ -0.75
TOP3A-201ENST00000321105 CRYZQ08257 329 aaKnown RBP10.39□□□□□ -0.75
TOP3A-201ENST00000321105 ZNF547Q8IVP9 402 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 SLC16A11Q8NCK7 471 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 OR8J2Q8NGG1 315 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 NDNFQ8TB73 568 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 DPH1Q9BZG8 443 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 AMBRA1Q9C0C7 1298 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 SPRTNQ9H040 489 aaPredicted RBP10.39□□□□□ -0.75
TOP3A-201ENST00000321105 GLIPR2Q9H4G4 154 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 COPS7AQ9UBW8 275 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 MED12Q93074 2177 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 DOCK8Q8NF50 2099 aa10.39□□□□□ -0.75
TOP3A-201ENST00000321105 ACOX3O15254 700 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 LILRB3O75022 631 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 CPNE3O75131 537 aaKnown RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 BCAS1O75363 584 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 CRHBPP24387 322 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 BMP8BP34820 402 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 EIF1AXP47813 144 aaKnown RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 TFF2Q03403 129 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 IL18R1Q13478 541 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 TRAM2Q15035 370 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 NKAIN2Q5VXU1 208 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 SLC27A4Q6P1M0 643 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 ASB18Q6ZVZ8 466 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 BMP8AQ7Z5Y6 402 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 MARCH9Q86YJ5 346 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 ZNF248Q8NDW4 579 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 ADAMTS16Q8TE57 1224 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 UCN3Q969E3 161 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 TM4SF18Q96CE8 201 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 DMRTB1Q96MA1 342 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 COQ10AQ96MF6 247 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 OR51E2Q9H255 320 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 MYNNQ9NPC7 610 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 MARK1Q9P0L2 795 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 CNOT11Q9UKZ1 510 aaKnown RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 MED31Q9Y3C7 131 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 TDRD15B5MCY1 1934 aaKnown RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 ZNF638Q14966 1978 aaKnown RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 C17orf113A0A1B0GUU1 675 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 HYAL3O43820 417 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 HOXB6P17509 224 aaKnown RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 NDUFV2P19404 249 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 ACVR1BP36896 505 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 NKX3-2P78367 333 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 POU6F2P78424 691 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 ABATP80404 500 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 DBPQ10586 325 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 SOWAHCQ53LP3 525 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 PIP5KL1Q5T9C9 394 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 C22orf42Q6IC83 251 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 TSPYL5Q86VY4 417 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 JAZF1Q86VZ6 243 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 LSRQ86X29 649 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 MFSD2AQ8NA29 543 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 CHTF18Q8WVB6 975 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 RIT1Q92963 219 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 ZNF354BQ96LW1 612 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 MS4A8Q9BY19 250 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 ELL3Q9HB65 397 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 PALMDQ9NP74 551 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 PAK1IP1Q9NWT1 392 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-201ENST00000321105 POLEQ07864 2286 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 XKRYO14609 159 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 ARHGEF9O43307 516 aa10.38□□□□□ -0.75
TOP3A-201ENST00000321105 CDC40O60508 579 aaKnown RBP eCLIP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms