RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CD3GP09693 182 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 LIMS3P0CW19 117 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 LIMS4P0CW20 117 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 GJA1P17302 382 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 SLC6A1P30531 599 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 MTNR1AP48039 350 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 CCR6P51684 374 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 MAP2K6P52564 334 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 MAP2K5Q13163 448 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 TAF12Q16514 161 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 SPIN4Q56A73 249 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 ZER1Q7Z7L7 766 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 NR2C2APQ86WQ0 139 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 SIPA1Q96FS4 1042 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 NLNQ9BYT8 704 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 BHLHE41Q9C0J9 482 aaPredicted RBP9.12□□□□□ -0.95
PTPRA-202ENST00000318266 FOLH1BQ9HBA9 442 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 IMP3Q9NV31 184 aaKnown RBP9.12□□□□□ -0.95
PTPRA-202ENST00000318266 TESQ9UGI8 421 aaKnown RBP9.12□□□□□ -0.95
PTPRA-202ENST00000318266 TEX13CA0A0J9YWL9 993 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 ZNF840PA6NDX5 716 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 POM121CA8CG34 1229 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 GFYI3L273 518 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 RTCAO00442 366 aaKnown RBP9.12□□□□□ -0.95
PTPRA-202ENST00000318266 SSNA1O43805 119 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 TPOP07202 933 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 ATP1B2P14415 290 aaPredicted RBP9.12□□□□□ -0.95
PTPRA-202ENST00000318266 GLULP15104 373 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 DRD5P21918 477 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 GIFP27352 417 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 RAB14P61106 215 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 SMAD3P84022 425 aaKnown RBP9.12□□□□□ -0.95
PTPRA-202ENST00000318266 PTSQ03393 145 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 PLD1Q13393 1074 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 SLBPQ14493 270 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPRA-202ENST00000318266 LGALSLQ3ZCW2 172 aaPredicted RBP9.12□□□□□ -0.95
PTPRA-202ENST00000318266 SYTL3Q4VX76 610 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 GRHL2Q6ISB3 625 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 LIPIQ6XZB0 460 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 TAS1R1Q7RTX1 841 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 KANSL1Q7Z3B3 1105 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 RTN4RL1Q86UN2 441 aaPredicted RBP9.12□□□□□ -0.95
PTPRA-202ENST00000318266 KLBQ86Z14 1044 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 C16orf78Q8WTQ4 265 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 PIGKQ92643 395 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 RFT1Q96AA3 541 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 C12orf66Q96MD2 445 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 ZFP3Q96NJ6 502 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 SOSTQ9BQB4 213 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 KCNK12Q9HB15 430 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 ZSCAN32Q9NX65 697 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 SLCO1C1Q9NYB5 712 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 CNIH4Q9P003 139 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 PTGFRNQ9P2B2 879 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 KCND3Q9UK17 655 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 CLEC4EQ9ULY5 219 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 HTTP42858 3142 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 RPS10-NUDT3A0A1W2PQS6 291 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 FAAHO00519 579 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 EIF4EP06730 217 aaKnown RBP9.12□□□□□ -0.95
PTPRA-202ENST00000318266 ZDHHC11BP0C7U3 371 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 DNASE1P24855 282 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 AP1S2P56377 157 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 TPBGQ13641 420 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 GRK1Q15835 563 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 OCLNQ16625 522 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 MED27Q6P2C8 311 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 MZT2AQ6P582 158 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 TMEM173Q86WV6 379 aaPredicted RBP9.12□□□□□ -0.95
PTPRA-202ENST00000318266 GPR135Q8IZ08 494 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 FAM26EQ8N5C1 309 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 OR5D16Q8NGK9 328 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 GTF3C2Q8WUA4 911 aaPredicted RBP9.12□□□□□ -0.95
PTPRA-202ENST00000318266 SLC22A12Q96S37 553 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 MED18Q9BUE0 208 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 FNDC11Q9BVV2 318 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 OR51J1Q9H342 316 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 KLHL1Q9NR64 748 aa9.12□□□□□ -0.95
PTPRA-202ENST00000318266 NPIPB8E9PQR5 432 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 H0YIV9 168 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 SLC28A2O43868 658 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 TALDO1P37837 337 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 CTSOP43234 321 aaPredicted RBP9.11□□□□□ -0.95
PTPRA-202ENST00000318266 SLC6A11P48066 632 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 CLCNKAP51800 687 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 ACLYP53396 1101 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 OR10A3P58181 314 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 POM121L1PQ3SYA9 428 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 LYPD4Q6UWN0 246 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 ARSKQ6UWY0 536 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 CFAP77Q6ZQR2 320 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 TRILQ7L0X0 811 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 CHST9Q7L1S5 443 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 ADGRF3Q8IZF5 1079 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 XAGE5Q8WWM1 108 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 MYLIPQ8WY64 445 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 HSD17B8Q92506 261 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 RBP7Q96R05 134 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 CRISPLD2Q9H0B8 497 aa9.11□□□□□ -0.95
PTPRA-202ENST00000318266 ZDHHC6Q9H6R6 413 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms