RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 UBE2FQ969M7 185 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 C16orf58Q96GQ5 468 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 FCRL4Q96PJ5 515 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 RSPO3Q9BXY4 272 aaPredicted RBP13.08□□□□□ -0.32
VAMP2-201ENST00000316509 SLC38A1Q9H2H9 487 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 LMAN1LQ9HAT1 526 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 RHCGQ9UBD6 479 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 REV1Q9UBZ9 1251 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 ZNF232Q9UNY5 417 aa13.08□□□□□ -0.32
VAMP2-201ENST00000316509 BLACEA4D250 179 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 CLDN24A6NM45 220 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 P2RX6O15547 441 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 BCAS1O75363 584 aaPredicted RBP13.07□□□□□ -0.32
VAMP2-201ENST00000316509 PIPP12273 146 aaPredicted RBP13.07□□□□□ -0.32
VAMP2-201ENST00000316509 SKP1P63208 163 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 HPCAP84074 193 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 SMN1Q16637 294 aaKnown RBP13.07□□□□□ -0.32
VAMP2-201ENST00000316509 ARHGAP11BQ3KRB8 267 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 PGBD2Q6P3X8 592 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 FLCNQ8NFG4 579 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 ZDHHC1Q8WTX9 485 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 ORAI3Q9BRQ5 295 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 DCUN1D5Q9BTE7 237 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 POLR2J2Q9GZM3 115 aaKnown RBP13.07□□□□□ -0.32
VAMP2-201ENST00000316509 POLR2J3Q9H1A7 115 aaKnown RBP13.07□□□□□ -0.32
VAMP2-201ENST00000316509 IL21RQ9HBE5 538 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 C19orf53Q9UNZ5 99 aaPredicted RBP13.07□□□□□ -0.32
VAMP2-201ENST00000316509 ATG2BQ96BY7 2078 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 MYO10Q9HD67 2058 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 LOC105369274A0A096LPK9 316 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 LOC102723532A0A0G2JNH3 316 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 GALR3O60755 368 aaPredicted RBP13.07□□□□□ -0.32
VAMP2-201ENST00000316509 SEMA7AO75326 666 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 GPR75O95800 540 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 AK1P00568 194 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 ATP1B1P05026 303 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 HHEXQ03014 270 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 C1orf94Q6P1W5 598 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 SLC16A12Q6ZSM3 486 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 PTCHD4Q6ZW05 846 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 AHSA2Q719I0 299 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 OR4N4Q8N0Y3 316 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 SDR16C5Q8N3Y7 309 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 ZCCHC10Q8TBK6 192 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 ZNF675Q8TD23 568 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 SLC38A4Q969I6 547 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 SLC35A4Q96G79 324 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 YIPF4Q9BSR8 244 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 PIGUQ9H490 435 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 UBE2ZQ9H832 354 aaPredicted RBP13.07□□□□□ -0.32
VAMP2-201ENST00000316509 POMT2Q9UKY4 750 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 RANBP2P49792 3224 aaKnown RBP13.07□□□□□ -0.32
VAMP2-201ENST00000316509 LRP4O75096 1905 aa13.07□□□□□ -0.32
VAMP2-201ENST00000316509 PLOD3O60568 738 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 SRPX2O60687 465 aaPredicted RBP13.06□□□□□ -0.32
VAMP2-201ENST00000316509 CD27P26842 260 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 MASP1P48740 699 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 OLR1P78380 273 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 ELOCQ15369 112 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 SEC23BQ15437 767 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 CTF1Q16619 201 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 LRIT3Q3SXY7 679 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 EXOSC6Q5RKV6 272 aaKnown RBP13.06□□□□□ -0.32
VAMP2-201ENST00000316509 TMEM201Q5SNT2 666 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 SLC25A30Q5SVS4 291 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 AP1ARQ63HQ0 302 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 C12orf73Q69YU5 71 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 Q6ZPB1 254 aaPredicted RBP13.06□□□□□ -0.32
VAMP2-201ENST00000316509 Q6ZS52 159 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 P2RY8Q86VZ1 359 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 RBM45Q8IUH3 476 aaKnown RBP13.06□□□□□ -0.32
VAMP2-201ENST00000316509 CSNK1A1LQ8N752 337 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 CADM4Q8NFZ8 388 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 OR7G2Q8NG99 324 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 SLC7A13Q8TCU3 470 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 CSF3RQ99062 836 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 STACQ99469 402 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 ITPAQ9BY32 194 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.06□□□□□ -0.32
VAMP2-201ENST00000316509 TTYH1Q9H313 450 aaPredicted RBP13.06□□□□□ -0.32
VAMP2-201ENST00000316509 TCEAL2Q9H3H9 227 aaPredicted RBP13.06□□□□□ -0.32
VAMP2-201ENST00000316509 AASSQ9UDR5 926 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 SATB2Q9UPW6 733 aa13.06□□□□□ -0.32
VAMP2-201ENST00000316509 IGHV1OR15-9A0A0B4J2B8 117 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 A0A1W2PPC1 479 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 TLR4O00206 839 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 NME6O75414 186 aaPredicted RBP13.05□□□□□ -0.32
VAMP2-201ENST00000316509 THBS1P07996 1170 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 GUSBP08236 651 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 POU2F1P14859 743 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 MAP2K4P45985 399 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 LSSP48449 732 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 RAB38P57729 211 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 CHRNEQ04844 493 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 ST3GAL3Q11203 375 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 PIN1Q13526 163 aaPredicted RBP13.05□□□□□ -0.32
VAMP2-201ENST00000316509 TRAM2Q15035 370 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 TCEA2Q15560 299 aa13.05□□□□□ -0.32
VAMP2-201ENST00000316509 ZNF829Q3KNS6 432 aaPredicted RBP13.05□□□□□ -0.32
VAMP2-201ENST00000316509 INAVAQ3KP66 663 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms