RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 APH1BQ8WW43 257 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 ARMC5Q96C12 935 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF764Q96H86 408 aaPredicted RBP6.31□□□□□ -1.4
ZNF540-201ENST00000316433 SUSD3Q96L08 255 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 FCRL2Q96LA5 508 aaPredicted RBP6.31□□□□□ -1.4
ZNF540-201ENST00000316433 KCNJ15Q99712 375 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 TGIF2Q9GZN2 237 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 P2RY12Q9H244 342 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 TMPRSS5Q9H3S3 457 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 TNFRSF12AQ9NP84 129 aa6.31□□□□□ -1.4
ZNF540-201ENST00000316433 A0A1B0GW55 424 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 NEMP2A6NFY4 417 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 YJEFN3A6XGL0 299 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 AGAP14A8MT82 685 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 C1orf196B1AJZ1 125 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 STK25O00506 426 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 ATP6AP2O75787 350 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 KRT33AO76009 404 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 TOXO94900 526 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 AGR2O95994 175 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 IFNA10P01566 189 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 DUX4L2P0CJ85 424 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 DUX4L3P0CJ86 424 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 DUX4L4P0CJ87 422 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 DUX4L5P0CJ88 424 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 DUX4L6P0CJ89 424 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 DUX4L7P0CJ90 424 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 LMO2P25791 158 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 HOXC12P31275 282 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 ATP6V1E1P36543 226 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 CD96P40200 585 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 SH3BP2P78314 561 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 DCDP81605 110 aaKnown RBP6.3□□□□□ -1.4
ZNF540-201ENST00000316433 NKG7Q16617 165 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 UPP1Q16831 310 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 MORN1Q5T089 497 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 B3GNTL1Q67FW5 361 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF549Q6P9A3 640 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 ZCCHC12Q6PEW1 402 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 ENPP6Q6UWR7 440 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 SERPINA11Q86U17 422 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 OR56A4Q8NGH8 313 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 OR2T35Q8NGX2 323 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 KAT2AQ92830 837 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 UBE2FQ969M7 185 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 SLAMF9Q96A28 289 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 LRR1Q96L50 414 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 OR2M2Q96R28 347 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 DMRTA2Q96SC8 542 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 OCSTAMPQ9BR26 566 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 ENKD1Q9H0I2 346 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 CLMPQ9H6B4 373 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 ACTR8Q9H981 624 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 TCF7L1Q9HCS4 588 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 DCAF13Q9NV06 445 aaKnown RBP6.3□□□□□ -1.4
ZNF540-201ENST00000316433 MPP6Q9NZW5 540 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 AKAP7Q9P0M2 348 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-201ENST00000316433 KLHL9Q9P2J3 617 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 NFKBIL1Q9UBC1 381 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-201ENST00000316433 DUX4Q9UBX2 424 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 POLR3HQ9Y535 204 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-201ENST00000316433 TMEM88BA6NKF7 163 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 TMEM200CA6NKL6 621 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 G3V3Q6 166 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 L7N2F9 121 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 SGK494L7N484 410 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 SCAMP2O15127 329 aaKnown RBP6.3□□□□□ -1.4
ZNF540-201ENST00000316433 HPP00738 406 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 PIPP12273 146 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-201ENST00000316433 HMGA1P17096 107 aaKnown RBP6.3□□□□□ -1.4
ZNF540-201ENST00000316433 SLC6A1P30531 599 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 HTR5AP47898 357 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 POLR2JP52435 117 aaKnown RBP6.3□□□□□ -1.4
ZNF540-201ENST00000316433 WNT3AP56704 352 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 CARD18P57730 90 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 HTRA4P83105 476 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-201ENST00000316433 SKP2Q13309 424 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 CRHR2Q13324 411 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 ALG11Q2TAA5 492 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 CCDC71Q8IV32 467 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF248Q8NDW4 579 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 OR9A2Q8NGT5 310 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 ROBO4Q8WZ75 1007 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 LRFN5Q96NI6 719 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 CAMK1GQ96NX5 476 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 FICDQ9BVA6 458 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 FN3KQ9H479 309 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 B3GAT2Q9NPZ5 323 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 GFOD1Q9NXC2 390 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 UTS2RQ9UKP6 389 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 PPT2Q9UMR5 302 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 MMACHCQ9Y4U1 282 aa6.3□□□□□ -1.4
ZNF540-201ENST00000316433 CLCA1A8K7I4 914 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 LDLRAD4O15165 306 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 CASC3O15234 703 aaKnown RBP6.29□□□□□ -1.4
ZNF540-201ENST00000316433 AOC2O75106 756 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 GRAP2O75791 330 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 KLHL18O94889 574 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 ESR1P03372 595 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 SBK2P0C263 348 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms