RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 PSG6Q00889 435 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 PDE7AQ13946 482 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 FAM180AQ6UWF9 173 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 OLIG3Q7RTU3 272 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 ANKRD46Q86W74 232 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 HPS6Q86YV9 775 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 LGI4Q8N135 537 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 OR8K3Q8NH51 312 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 NR4A3Q92570 626 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 PPCDCQ96CD2 204 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 ELP4Q96EB1 424 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 PPP3R2Q96LZ3 170 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 NODALQ96S42 347 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 DEFB127Q9H1M4 99 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 GALNT9Q9HCQ5 603 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 SIRT3Q9NTG7 399 aaPredicted RBP11.09□□□□□ -0.63
SCFD1-201ENST00000311943 THAP1Q9NVV9 213 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 PSME2Q9UL46 239 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 NPFFR2Q9Y5X5 522 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 LIPGQ9Y5X9 500 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 HIVEP3Q5T1R4 2406 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 ANKUB1A6NFN9 424 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 ANKRD28O15084 1053 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 SCAMP2O15127 329 aaKnown RBP11.08□□□□□ -0.64
SCFD1-201ENST00000311943 UGT2B11O75310 529 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 SLC18A1P54219 525 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 UFM1P61960 85 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 AP2B1P63010 937 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 HIST2H2BCQ6DN03 193 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 SZRD1Q7Z422 152 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 CHERPQ8IWX8 916 aaKnown RBP11.08□□□□□ -0.64
SCFD1-201ENST00000311943 RIMKLAQ8IXN7 391 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 OR2M7Q8NG81 312 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 OR5L2Q8NGL0 311 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 OR5AK3PQ8NH89 298 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 PIK3R3Q92569 461 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 TMBIM1Q969X1 311 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 EFHD2Q96C19 240 aaPredicted RBP11.08□□□□□ -0.64
SCFD1-201ENST00000311943 C5orf34Q96MH7 638 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 VSTM2LQ96N03 204 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 VIPAS39Q9H9C1 493 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 MEAF6Q9HAF1 191 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 FOLH1BQ9HBA9 442 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 FBXO34Q9NWN3 711 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 TUBA8Q9NY65 449 aaPredicted RBP11.08□□□□□ -0.64
SCFD1-201ENST00000311943 TAS2R7Q9NYW3 318 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 ZNF407Q9C0G0 2248 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 GXYLT2A0PJZ3 443 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 PDPK1O15530 556 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 DYRK3O43781 588 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 C6orf47O95873 294 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 GALNSP34059 522 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 MPIP34949 423 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 RFX3P48380 749 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 DGKQP52824 942 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 WNT3P56703 355 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 PPP2R2AP63151 447 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 KCNC4Q03721 635 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 FOXO1Q12778 655 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 PGS1Q32NB8 556 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 OR4F3Q6IEY1 312 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 RPUSD3Q6P087 351 aaKnown RBP11.08□□□□□ -0.64
SCFD1-201ENST00000311943 ZAR1Q86SH2 424 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 SIAH3Q8IW03 269 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 FAM9CQ8IZT9 166 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 FAM76AQ8TAV0 307 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 SPACA9Q96E40 222 aaPredicted RBP11.08□□□□□ -0.64
SCFD1-201ENST00000311943 JSRP1Q96MG2 331 aaPredicted RBP11.08□□□□□ -0.64
SCFD1-201ENST00000311943 PELOQ9BRX2 385 aaKnown RBP11.08□□□□□ -0.64
SCFD1-201ENST00000311943 SH2D2AQ9NP31 389 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 OSGIN2Q9Y236 505 aa11.08□□□□□ -0.64
SCFD1-201ENST00000311943 EXPH5Q8NEV8 1989 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 ASPDHA6ND91 283 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 CDC40O60508 579 aaKnown RBP eCLIP11.07□□□□□ -0.64
SCFD1-201ENST00000311943 KLHL41O60662 606 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 IGKV1D-16P01601 117 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 FBXO45P0C2W1 286 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 MAGEA5P43359 124 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 RPS26P62854 115 aaKnown RBP11.07□□□□□ -0.64
SCFD1-201ENST00000311943 EMX2Q04743 252 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 FNDC7Q5VTL7 733 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 C1QL3Q5VWW1 255 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 OR5M10Q6IEU7 315 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 BCORP1Q8N888 145 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 OR9I1Q8NGQ6 314 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 ZNF675Q8TD23 568 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 TMEM125Q96AQ2 219 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 OMA1Q96E52 524 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 ART5Q96L15 291 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 KLHDC3Q9BQ90 382 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 CXorf36Q9H7Y0 433 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 ERRFI1Q9UJM3 462 aaPredicted RBP11.07□□□□□ -0.64
SCFD1-201ENST00000311943 GPR55Q9Y2T6 319 aaPredicted RBP11.07□□□□□ -0.64
SCFD1-201ENST00000311943 KCNE3Q9Y6H6 103 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 FREM3P0C091 2139 aa11.07□□□□□ -0.64
SCFD1-201ENST00000311943 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 ERN1O75460 977 aaKnown RBP11.06□□□□□ -0.64
SCFD1-201ENST00000311943 PTGDSP41222 190 aa11.06□□□□□ -0.64
SCFD1-201ENST00000311943 FRKP42685 505 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-201ENST00000311943 MANFP55145 182 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms