RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 ENGP17813 658 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 AQP1P29972 269 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 PKLRP30613 574 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 FRKP42685 505 aaPredicted RBP3.04□□□□□ -1.92
CLOCK-201ENST00000309964 SLC9A3P48764 834 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 CDH12P55289 794 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 CHAF1BQ13112 559 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 PDE7AQ13946 482 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 Q6ZSR6 202 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.04□□□□□ -1.92
CLOCK-201ENST00000309964 LHFPL3Q86UP9 236 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 MMP21Q8N119 569 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 KCT2Q8NC54 265 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 THAP4Q8WY91 577 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 PMEPA1Q969W9 287 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 ZBTB10Q96DT7 871 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 DTD2Q96FN9 168 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 BOD1Q96IK1 185 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 BTF3L4Q96K17 158 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 PRAP1Q96NZ9 151 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 MED28Q9H204 178 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 METTL8Q9H825 291 aaKnown RBP3.04□□□□□ -1.92
CLOCK-201ENST00000309964 INPP5EQ9NRR6 644 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 CENPMQ9NSP4 180 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 COL5A3P25940 1745 aaPredicted RBP3.04□□□□□ -1.92
CLOCK-201ENST00000309964 TRBV23OR9-2A0A075B6M9 112 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 IGLON5A6NGN9 336 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 CREG1O75629 220 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 HPRP00739 348 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 CCNOP22674 350 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 HOXA11P31270 313 aaPredicted RBP3.04□□□□□ -1.92
CLOCK-201ENST00000309964 NUDT6P53370 316 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 RPS13P62277 151 aaKnown RBP3.04□□□□□ -1.92
CLOCK-201ENST00000309964 RIN1Q13671 783 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 PTGR1Q14914 329 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 EIF2S3LQ2VIR3 472 aaKnown RBP3.04□□□□□ -1.92
CLOCK-201ENST00000309964 SLC36A2Q495M3 483 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 SH3PXD2AQ5TCZ1 1133 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 CXorf57Q6NSI4 855 aaKnown RBP3.04□□□□□ -1.92
CLOCK-201ENST00000309964 RBM44Q6ZP01 1051 aaKnown RBP3.04□□□□□ -1.92
CLOCK-201ENST00000309964 SPEM1Q8N4L4 309 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 JAGN1Q8N5M9 183 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 ACBD7Q8N6N7 88 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 YIPF7Q8N8F6 280 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 Q8N9G6 341 aaPredicted RBP3.04□□□□□ -1.92
CLOCK-201ENST00000309964 OR14L1PQ8NHC6 308 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 JAM3Q9BX67 310 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 NKX2-4Q9H2Z4 354 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 AKTIPQ9H8T0 292 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 FKBP7Q9Y680 259 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 BRWD3Q6RI45 1802 aa3.04□□□□□ -1.92
CLOCK-201ENST00000309964 SHANK3Q9BYB0 1731 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 A0A0D9SEW6 157 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 H0YIG0 161 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 CREBL2O60519 120 aaPredicted RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 TMEM127O75204 238 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 RETP07949 1114 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ADORA3P0DMS8 318 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 CHRM1P11229 460 aaPredicted RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 GM2AP17900 193 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 NR4A2P43354 598 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 CAV3P56539 151 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SLC35F1Q5T1Q4 408 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 CLEC6AQ6EIG7 209 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 GOLGA7Q7Z5G4 137 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SATL1Q86VE3 508 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ZBTB8BQ8NAP8 495 aaPredicted RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SMG8Q8ND04 991 aaKnown RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PYCR2Q96C36 320 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 TIMD4Q96H15 378 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SGIP1Q9BQI5 828 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 DHRS4Q9BTZ2 278 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 RNF39Q9H2S5 420 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 TAS2R1Q9NYW7 299 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 DHDHQ9UQ10 334 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 OR1A2Q9Y585 309 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 KIAA1551Q9HCM1 1747 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 FABP12A6NFH5 140 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 DRGXA6NNA5 263 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 E7ESA3 106 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 HOXC11O43248 304 aaPredicted RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 BCKDHAP12694 445 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PCMT1P22061 227 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ID4P47928 161 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SLC18A2Q05940 514 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PRAMEF8Q5VWM4 474 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PRAMEF7Q5VXH5 474 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SLC22A10Q63ZE4 541 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PNCKQ6P2M8 343 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 NIPAL3Q6P499 406 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SERPINA11Q86U17 422 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF280BQ86YH2 543 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 CMIPQ8IY22 773 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 FBXL8Q96CD0 374 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 RTP4Q96DX8 246 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SECISBP2Q96T21 854 aaKnown RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 CIDEBQ9UHD4 219 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 STUB1Q9UNE7 303 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 TFR2Q9UP52 801 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 MRPL42Q9Y6G3 142 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms