RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 EXD2Q9NVH0 621 aa21.04■□□□□ 0.96
IRF3-201ENST00000309877 CTSFQ9UBX1 484 aa21.04■□□□□ 0.96
IRF3-201ENST00000309877 PRAMEF27A3QJZ7 478 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 CBX7O95931 251 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 OPN1SWP03999 348 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 PGDP52209 483 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 RHAGQ02094 409 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 GPAT3Q53EU6 434 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 STPG1Q5TH74 334 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 HMBOX1Q6NT76 420 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 C16orf62Q7Z3J2 963 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 ANKFN1Q8N957 763 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 CDRT4Q8N9R6 151 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 SLC16A11Q8NCK7 471 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 TAMM41Q96BW9 452 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 SLC35A4Q96G79 324 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 ZNF578Q96N58 590 aaPredicted RBP21.03■□□□□ 0.96
IRF3-201ENST00000309877 ZNF607Q96SK3 696 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 TGIF2Q9GZN2 237 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 AGPAT4Q9NRZ5 378 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 ZNF639Q9UID6 485 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 MKL2Q9ULH7 1088 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 LIPT1Q9Y234 373 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 PCDHGA1Q9Y5H4 931 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 KCNE3Q9Y6H6 103 aa21.03■□□□□ 0.96
IRF3-201ENST00000309877 ASCC3Q8N3C0 2202 aaKnown RBP21.03■□□□□ 0.96
IRF3-201ENST00000309877 FAM149AA5PLN7 773 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 B4E171 279 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 DYRK3O43781 588 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 LDLRP01130 860 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 ALOX5P09917 674 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 PEX2P28328 305 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 TSPAN7P41732 249 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 CRYBA2P53672 197 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 SELENOWP63302 87 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 MAPK11Q15759 364 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 GRAMD1BQ3KR37 738 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 VTCN1Q7Z7D3 282 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 KRT73Q86Y46 540 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 BBS10Q8TAM1 723 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 STT3BQ8TCJ2 826 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 TSLPQ969D9 159 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 DOHHQ9BU89 302 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 CNPPD1Q9BV87 410 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 IFT80Q9P2H3 777 aaPredicted RBP21.02■□□□□ 0.96
IRF3-201ENST00000309877 LOXL2Q9Y4K0 774 aa21.02■□□□□ 0.96
IRF3-201ENST00000309877 IGKV3D-11A0A0A0MRZ8 115 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 C17orf105B2RV13 164 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 S1PR1P21453 382 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 AGXTP21549 392 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 TRIP6Q15654 476 aaKnown RBP21.02■□□□□ 0.95
IRF3-201ENST00000309877 NSDHLQ15738 373 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 ATP6AP1Q15904 470 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 OGFRL1Q5TC84 451 aaPredicted RBP21.02■□□□□ 0.95
IRF3-201ENST00000309877 CDS1Q92903 461 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 CENPNQ96H22 339 aaPredicted RBP21.02■□□□□ 0.95
IRF3-201ENST00000309877 TREX2Q9BQ50 279 aaPredicted RBP21.02■□□□□ 0.95
IRF3-201ENST00000309877 KLHL4Q9C0H6 718 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 VN1R1Q9GZP7 353 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 C14orf105Q9NVL8 296 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 GIN1Q9NXP7 522 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 CALML5Q9NZT1 146 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 PCDHGB3Q9Y5G1 929 aa21.02■□□□□ 0.95
IRF3-201ENST00000309877 IGLV3-12A0A075B6K2 115 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 MEN1O00255 615 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 DEAF1O75398 565 aaPredicted RBP21.01■□□□□ 0.95
IRF3-201ENST00000309877 ONECUT2O95948 504 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 ZGLP1P0C6A0 271 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 ACP2P11117 423 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 RORAP35398 523 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 FUT5Q11128 374 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 ZNF155Q12901 538 aaPredicted RBP21.01■□□□□ 0.95
IRF3-201ENST00000309877 ZNF385CQ66K41 422 aaPredicted RBP21.01■□□□□ 0.95
IRF3-201ENST00000309877 OVCH1Q7RTY7 1134 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 PIP4P1Q86T03 277 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 LAPTM4BQ86VI4 370 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 TMEM151BQ8IW70 566 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 ICA1LQ8NDH6 482 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 CATSPER1Q8NEC5 780 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 TRNT1Q96Q11 434 aaKnown RBP21.01■□□□□ 0.95
IRF3-201ENST00000309877 PIGUQ9H490 435 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 BCL2L10Q9HD36 194 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 ERVK-19Q9WJR5 959 aa21.01■□□□□ 0.95
IRF3-201ENST00000309877 A0A0G2JPF8 293 aa21■□□□□ 0.95
IRF3-201ENST00000309877 SYNDIG1LA6NDD5 238 aa21■□□□□ 0.95
IRF3-201ENST00000309877 A8MUA0 341 aa21■□□□□ 0.95
IRF3-201ENST00000309877 HNRNPCL2B2RXH8 293 aa21■□□□□ 0.95
IRF3-201ENST00000309877 HNRNPCL3B7ZW38 293 aa21■□□□□ 0.95
IRF3-201ENST00000309877 CLOCKO15516 846 aa21■□□□□ 0.95
IRF3-201ENST00000309877 SERPINB7O75635 380 aa21■□□□□ 0.95
IRF3-201ENST00000309877 HNRNPCL4P0DMR1 293 aa21■□□□□ 0.95
IRF3-201ENST00000309877 SSTR4P31391 388 aa21■□□□□ 0.95
IRF3-201ENST00000309877 HPCAP84074 193 aa21■□□□□ 0.95
IRF3-201ENST00000309877 ZNHIT3Q15649 155 aaPredicted RBP21■□□□□ 0.95
IRF3-201ENST00000309877 DUSP5Q16690 384 aa21■□□□□ 0.95
IRF3-201ENST00000309877 ISXQ2M1V0 245 aa21■□□□□ 0.95
IRF3-201ENST00000309877 PRAMEF8Q5VWM4 474 aa21■□□□□ 0.95
IRF3-201ENST00000309877 PRAMEF7Q5VXH5 474 aa21■□□□□ 0.95
IRF3-201ENST00000309877 CDCP2Q5VXM1 449 aa21■□□□□ 0.95
IRF3-201ENST00000309877 ZDHHC21Q8IVQ6 265 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms