RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ADGRG4Q8IZF6 3080 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 DOPEY1Q5JWR5 2465 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 C1orf232A0A0U1RR37 186 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CXorf51AA0A1B0GTR3 108 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 A0A1W2PQM1 296 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 IGLON5A6NGN9 336 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 SAGE2PA6NJ88 616 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 TTC36A6NLP5 189 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CLDN24A6NM45 220 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 ANKRD66B4E2M5 251 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 E5RI56 91 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 E9PQ18 207 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CCL22O00626 93 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 OR7A17O14581 309 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 GNGT2O14610 69 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 AREL1O15033 823 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 STX7O15400 261 aaKnown RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 AQP9O43315 295 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CNOT3O75175 753 aaKnown RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CREG1O75629 220 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CCNDBP1O95273 360 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CLIC3O95833 236 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CAPN1P07384 714 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 HTR1AP08908 422 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CBSLP0DN79 551 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 G6PDP11413 515 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 ADRB3P13945 408 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF7P17097 686 aaPredicted RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 HOXB9P17482 250 aaPredicted RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 EFNA1P20827 205 aaPredicted RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 NFKBIAP25963 317 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 ELK4P28324 431 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CD40LGP29965 261 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 PRDX3P30048 256 aaKnown RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 AKT2P31751 481 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 MC4RP32245 332 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CBSP35520 551 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 IGFALSP35858 605 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 UGT2B10P36537 528 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 DCTP40126 519 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 NNMTP40261 264 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 GNPDA1P46926 289 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 AGTR2P50052 363 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 GZMMP51124 257 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 DUSP3P51452 185 aaPredicted RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 ARHGDIAP52565 204 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 TPD52P55327 224 aaPredicted RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CLDN8P56748 225 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 HNRNPKP61978 463 aaKnown RBP eCLIP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CYP4F2P78329 520 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 IL13RA1P78552 427 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 ARF5P84085 180 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CDC20Q12834 499 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 TRAF3Q13114 568 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 KRR1Q13601 381 aaKnown RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 GTF2H2Q13888 395 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CLCA4Q14CN2 919 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 TCEA2Q15560 299 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CTF1Q16619 201 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 ANKDD1AQ495B1 522 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 GGTA1PQ4G0N0 100 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 PYCR3Q53H96 274 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 INO80DQ53TQ3 878 aaPredicted RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 LRRC73Q5JTD7 316 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CTSL3PQ5NE16 218 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 OTUD3Q5T2D3 398 aaPredicted RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 AGAP7PQ5VUJ5 663 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 MLIPQ5VWP3 458 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CAPN13Q6MZZ7 669 aaPredicted RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 GTF2H2CQ6P1K8 395 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 NEK5Q6P3R8 708 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 C22orf39Q6P5X5 142 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 ERICH5Q6P6B1 374 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 SHQ1Q6PI26 577 aaKnown RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 NCCRP1Q6ZVX7 275 aaPredicted RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 DET1Q7L5Y6 550 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 PIWIL3Q7Z3Z3 882 aaKnown RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 GOLGA7Q7Z5G4 137 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 SNX20Q7Z614 316 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 DSG4Q86SJ6 1040 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 VASH2Q86V25 355 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 TCAIMQ8N3R3 496 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 TMEM132CQ8N3T6 1108 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CDYL2Q8N8U2 506 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 SCAIQ8N9R8 606 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.63□□□□□ -1.675e-12■□□□□ 8.1
CKS1B-201ENST00000308987 LMX1AQ8TE12 382 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CHAC2Q8WUX2 184 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 FAR1Q8WVX9 515 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 RORBQ92753 470 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 TESCQ96BS2 214 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 RHBDF1Q96CC6 855 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 YIPF6Q96EC8 236 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 PYURFQ96I23 114 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 METTL2AQ96IZ6 378 aaKnown RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 ITCHQ96J02 903 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 PPM1MQ96MI6 270 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CCNL2Q96S94 520 aaPredicted RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CSF3RQ99062 836 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 APOL4Q9BPW4 351 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms