RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 POTEKPQ9BYX7 375 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 INSL5Q9Y5Q6 135 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 TRBV2A0A0J9YWF9 115 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 GPR39O43194 453 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 STATHP02808 62 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 KLHL26Q53HC5 615 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 SLC8B1Q6J4K2 584 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 CREB3L2Q70SY1 520 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 HMGN2P46Q86SG4 172 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 LRRC28Q86X40 367 aaPredicted RBP18.34■□□□□ 0.53
USP48-201ENST00000308271 STOML3Q8TAV4 291 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 FKBP10Q96AY3 582 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 RNF208Q9H0X6 261 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 NANSQ9NR45 359 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 KLHL9Q9P2J3 617 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 GLS2Q9UI32 602 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 FBXL21Q9UKT6 434 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 WASHC1A8K0Z3 465 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 M0R3H8 397 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 LEFTY1O75610 366 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 NDUFS1P28331 727 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 CTBP2P56545 445 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 RRAS2P62070 204 aaPredicted RBP18.34■□□□□ 0.53
USP48-201ENST00000308271 LRIT3Q3SXY7 679 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 OR51A7Q8NH64 312 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 CXCL16Q9H2A7 254 aa18.34■□□□□ 0.53
USP48-201ENST00000308271 NAP1L6A6NFF2 107 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 FMO6PO60774 539 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 PTNP21246 168 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 OR3A3P47888 321 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 OR3A2P47893 321 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 COL28A1Q2UY09 1125 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 FAM76BQ5HYJ3 339 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 PLPP4Q5VZY2 271 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 PLBD1Q6P4A8 553 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.33■□□□□ 0.53
USP48-201ENST00000308271 HSPA12BQ96MM6 686 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 SMIM14Q96QK8 99 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 PRSS21Q9Y6M0 314 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 MYH14Q7Z406 1995 aaKnown RBP18.33■□□□□ 0.53
USP48-201ENST00000308271 TTC34A8MYJ7 566 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 GJB3O75712 270 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 GALTP07902 379 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 GTF2F2P13984 249 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 HTR2AP28223 471 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 EVI2BP34910 448 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 GAS6Q14393 721 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 POU4F3Q15319 338 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 DEFB115Q30KQ5 88 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 ESCO2Q56NI9 601 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 OTUD1Q5VV17 481 aaPredicted RBP18.33■□□□□ 0.53
USP48-201ENST00000308271 KIAA1324Q6UXG2 1013 aaKnown RBP18.33■□□□□ 0.53
USP48-201ENST00000308271 ABHD13Q7L211 337 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 TTC9BQ8N6N2 239 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 ZNF366Q8N895 744 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 OR14C36Q8NHC7 312 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 SCGB3A2Q96PL1 93 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 RBCK1Q9BYM8 510 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 C11orf54Q9H0W9 315 aaPredicted RBP18.33■□□□□ 0.53
USP48-201ENST00000308271 MYNNQ9NPC7 610 aa18.33■□□□□ 0.53
USP48-201ENST00000308271 C1orf226A1L170 272 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 TFP02787 698 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 GIPRP48546 466 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 ENPP2Q13822 863 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 ZNF805Q5CZA5 627 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 GALNTL5Q7Z4T8 443 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 APCDD1Q8J025 514 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 GPR26Q8NDV2 337 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 UBE2FQ969M7 185 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 CCDC120Q96HB5 630 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 C1QTNF3Q9BXJ4 246 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 ICMTO60725 284 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 PRH1P02810 166 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 ARAFP10398 606 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 HLA-EP13747 358 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 TYRP14679 529 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 GJA1P17302 382 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 GALEQ14376 348 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 GRK1Q15835 563 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 LRIF1Q5T3J3 769 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 SLX4IPQ5VYV7 408 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 FAM205BPQ63HN1 556 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 ASB11Q8WXH4 323 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 AHCYL2Q96HN2 611 aaKnown RBP18.33■□□□□ 0.52
USP48-201ENST00000308271 LRIG1Q96JA1 1093 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 GABARAPL1Q9H0R8 117 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 PLCXD1Q9NUJ7 323 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 ATPIF1Q9UII2 106 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 SH2B3Q9UQQ2 575 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 PCDHGA6Q9Y5G7 932 aa18.33■□□□□ 0.52
USP48-201ENST00000308271 SLC43A1O75387 559 aa18.32■□□□□ 0.52
USP48-201ENST00000308271 UCHL1P09936 223 aa18.32■□□□□ 0.52
USP48-201ENST00000308271 CCR7P32248 378 aa18.32■□□□□ 0.52
USP48-201ENST00000308271 TAS2R38P59533 333 aa18.32■□□□□ 0.52
USP48-201ENST00000308271 RBM23Q86U06 439 aaKnown RBP18.32■□□□□ 0.52
USP48-201ENST00000308271 CAMKVQ8NCB2 501 aa18.32■□□□□ 0.52
USP48-201ENST00000308271 YIPF6Q96EC8 236 aa18.32■□□□□ 0.52
USP48-201ENST00000308271 ALG8Q9BVK2 526 aa18.32■□□□□ 0.52
USP48-201ENST00000308271 TAS2R8Q9NYW2 309 aa18.32■□□□□ 0.52
USP48-201ENST00000308271 GLTPD2A6NH11 291 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms