RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 RHBDD2Q6NTF9 364 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 PWWP2BQ6NUJ5 590 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 MFSD12Q6NUT3 480 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 CCDC80Q76M96 950 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 COX15Q7KZN9 410 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 EIF3MQ7L2H7 374 aaKnown RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 OLIG3Q7RTU3 272 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 WDR53Q7Z5U6 358 aaPredicted RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 VTCN1Q7Z7D3 282 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 NAXDQ8IW45 347 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 LGI4Q8N135 537 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 EID3Q8N140 333 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF675Q8TD23 568 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 SLC38A5Q8WUX1 472 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 TAMM41Q96BW9 452 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 CTHRC1Q96CG8 243 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 MS4A4EQ96PG1 132 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 EFHD1Q9BUP0 239 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 CHID1Q9BWS9 393 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 RSPO3Q9BXY4 272 aaPredicted RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 UGT2B28Q9BY64 529 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 C3orf14Q9HBI5 128 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF304Q9HCX3 659 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 SLC22A11Q9NSA0 550 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 SEMA4GQ9NTN9 838 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 DDX18Q9NVP1 670 aaKnown RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 PTGFRNQ9P2B2 879 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 C19orf53Q9UNZ5 99 aaPredicted RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 MRPS33Q9Y291 106 aaKnown RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 CCDC88CQ9P219 2028 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 EFCAB7A8K855 629 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 PLOD3O60568 738 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 CBX7O95931 251 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 S1PR1P21453 382 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 FBLP22087 321 aaKnown RBP6.5□□□□□ -1.37
PTCD2-201ENST00000308077 HSD17B7P56937 341 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 CHRNB3Q05901 458 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 STX4Q12846 297 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 TRA2AQ13595 282 aaKnown RBP eCLIP6.5□□□□□ -1.37
PTCD2-201ENST00000308077 EXOSC7Q15024 291 aaKnown RBP6.5□□□□□ -1.37
PTCD2-201ENST00000308077 FAM98BQ52LJ0 330 aaKnown RBP6.5□□□□□ -1.37
PTCD2-201ENST00000308077 CYBRD1Q53TN4 286 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 CRB2Q5IJ48 1285 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 EXOSC6Q5RKV6 272 aaKnown RBP6.5□□□□□ -1.37
PTCD2-201ENST00000308077 REEP3Q6NUK4 255 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 BHLHB9Q6PI77 547 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 MED25Q71SY5 747 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 EPHX4Q8IUS5 362 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 TMEM126BQ8IUX1 230 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 TMEM151BQ8IW70 566 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 SLC44A2Q8IWA5 706 aaPredicted RBP6.5□□□□□ -1.37
PTCD2-201ENST00000308077 BMPERQ8N8U9 685 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 ANKFN1Q8N957 763 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 XAGE5Q8WWM1 108 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 PYURFQ96I23 114 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 HSH2DQ96JZ2 352 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 OR7D2Q96RA2 312 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 YIPF2Q9BWQ6 316 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 ALOXE3Q9BYJ1 711 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 MAGIXQ9H6Y5 334 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 RUBCNLQ9H714 662 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 TMEM9BQ9NQ34 198 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 TRPC4Q9UBN4 977 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF639Q9UID6 485 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 RARRES3Q9UL19 164 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 SAMD4AQ9UPU9 718 aaKnown RBP6.5□□□□□ -1.37
PTCD2-201ENST00000308077 ANGPT4Q9Y264 503 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 LRRC42Q9Y546 428 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 AK5Q9Y6K8 562 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 KIF26BQ2KJY2 2108 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 A0A087WV62 115 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 M0QX08 132 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 HRKO00198 91 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 CLDN4O14493 209 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 OR10H2O60403 315 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 SCRG1O75711 98 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 BMP10O95393 424 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 CHRM4P08173 479 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 RPSAP08865 295 aaKnown RBP6.5□□□□□ -1.37
PTCD2-201ENST00000308077 IFI6P09912 130 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 ACP2P11117 423 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 TGM1P22735 817 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 FASP25445 335 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 MAGEA2P43356 314 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 MAGEA8P43361 318 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 CLCN2P51788 898 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 CLDN6P56747 220 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 FOXL2P58012 376 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 KCNJ10P78508 379 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 RHAGQ02094 409 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 ATP6AP1Q15904 470 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 SFT2D3Q587I9 215 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 VWA2Q5GFL6 755 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 INTS11Q5TA45 600 aaKnown RBP6.5□□□□□ -1.37
PTCD2-201ENST00000308077 ARHGAP40Q5TG30 622 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF385CQ66K41 422 aaPredicted RBP6.5□□□□□ -1.37
PTCD2-201ENST00000308077 SLC30A8Q8IWU4 369 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 ST13P4Q8IZP2 240 aaPredicted RBP6.5□□□□□ -1.37
PTCD2-201ENST00000308077 SLC16A11Q8NCK7 471 aa6.5□□□□□ -1.37
PTCD2-201ENST00000308077 TSLPQ969D9 159 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms