RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 GPATCH2Q9NW75 528 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 DKK3Q9UBP4 350 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 KCNK6Q9Y257 313 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 GREB1Q4ZG55 1949 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 TRBV5-3A0A0A0MS03 114 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 J3QLW9 94 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 SAGP10523 405 aaPredicted RBP13.79□□□□□ -0.2
PTPN9-201ENST00000306726 TYRP14679 529 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 ZNF19P17023 458 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 HNMTP50135 292 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 GZMMP51124 257 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 ATP12AP54707 1039 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 Q5BKY6 102 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 PXDC1Q5TGL8 231 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 TMEM184AQ6ZMB5 413 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 TMEFF1Q8IYR6 380 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 LRRC17Q8N6Y2 441 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 BTN2A2Q8WVV5 523 aa13.79□□□□□ -0.2
PTPN9-201ENST00000306726 TEX10Q9NXF1 929 aaPredicted RBP13.79□□□□□ -0.2
PTPN9-201ENST00000306726 MRPL39Q9NYK5 338 aaKnown RBP13.79□□□□□ -0.2
PTPN9-201ENST00000306726 A0A1W2PS29 197 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 PROS1P07225 676 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 ZDHHC11BP0C7U3 371 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 GNSP15586 552 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 KELP23276 732 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 RGS8P57771 180 aaPredicted RBP13.78□□□□□ -0.2
PTPN9-201ENST00000306726 E2F2Q14209 437 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 SYNPOQ8N3V7 929 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 GRHL3Q8TE85 626 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 UFD1Q92890 307 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 ZG16BQ96DA0 208 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 DHRS1Q96LJ7 313 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 MCCC1Q96RQ3 725 aaPredicted RBP13.78□□□□□ -0.2
PTPN9-201ENST00000306726 MND1Q9BWT6 205 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 KLF16Q9BXK1 252 aaPredicted RBP13.78□□□□□ -0.2
PTPN9-201ENST00000306726 OR51I1Q9H343 314 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 ZNF576Q9H609 170 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 ASAH2Q9NR71 780 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 FAM171A2A8MVW0 826 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 GCM2O75603 506 aaPredicted RBP13.78□□□□□ -0.2
PTPN9-201ENST00000306726 PTPN2P17706 415 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 CDK10Q15131 360 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 PIP5KL1Q5T9C9 394 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 TMEM107Q6UX40 140 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 PLEKHM3Q6ZWE6 761 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 AMER3Q8N944 861 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 LRRC20Q8TCA0 184 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 PDLIM5Q96HC4 596 aaKnown RBP13.78□□□□□ -0.2
PTPN9-201ENST00000306726 CRELD1Q96HD1 420 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 ST6GAL2Q96JF0 529 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 EPYCQ99645 322 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 BTBD2Q9BX70 525 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 ANKRD61A6NGH8 418 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 DNAJB5O75953 348 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 CSF3P09919 207 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 ACP5P13686 325 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 RFX2P48378 723 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 CENPAP49450 140 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 CLCNKAP51800 687 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 SUZ12Q15022 739 aaKnown RBP13.78□□□□□ -0.2
PTPN9-201ENST00000306726 CCNJQ5T5M9 372 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 POMZP3Q6PJE2 187 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 RPTNQ6XPR3 784 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 LUZP2Q86TE4 346 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 DENND6BQ8NEG7 585 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 OR8K5Q8NH50 307 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 OR8K3Q8NH51 312 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 SLC7A6Q92536 515 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 TRIM63Q969Q1 353 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 FERD3LQ96RJ6 166 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 MICU1Q9BPX6 476 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 STUB1Q9UNE7 303 aa13.78□□□□□ -0.2
PTPN9-201ENST00000306726 LEFTY2O00292 366 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 IGLV3-27P01718 113 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 VIPR1P32241 457 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 GPR19Q15760 415 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 MPPE1Q53F39 396 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 KLHDC8BQ8IXV7 354 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 OXR1Q8N573 874 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 BBS1Q8NFJ9 593 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 TADA1Q96BN2 335 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 NARS2Q96I59 477 aaKnown RBP13.77□□□□□ -0.2
PTPN9-201ENST00000306726 ZNF607Q96SK3 696 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 NKX3-1Q99801 234 aaPredicted RBP13.77□□□□□ -0.2
PTPN9-201ENST00000306726 ZSCAN5AQ9BUG6 496 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 RETREG1Q9H6L5 497 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 ADAP2Q9NPF8 381 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 SLAMF7Q9NQ25 335 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 ENAMQ9NRM1 1142 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 SEC14L4Q9UDX3 406 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 TMPRSS11EQ9UL52 423 aa13.77□□□□□ -0.2
PTPN9-201ENST00000306726 COL4A4P53420 1690 aaPredicted RBP13.77□□□□□ -0.21
PTPN9-201ENST00000306726 CRYZL1O95825 349 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 PPIBP23284 216 aaKnown RBP13.77□□□□□ -0.21
PTPN9-201ENST00000306726 EPHA5P54756 1037 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 VSX2P58304 361 aaPredicted RBP13.77□□□□□ -0.21
PTPN9-201ENST00000306726 PRKCDQ05655 676 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 NNATQ16517 81 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 ARTNQ5T4W7 220 aa13.77□□□□□ -0.21
PTPN9-201ENST00000306726 IRAK1BP1Q5VVH5 260 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms